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Publications

2023

Lista María José, Jousset Anne-Caroline, Cheng Mingpan, Saint-André Violaine, Perrot Elouan, Rodrigues Melissa, Primo Carmelo Di, Gadelle Danielle, Toccafondi Elenia, Segeral Emmanuel, Berlioz-Torrent Clarisse, Emiliani Stéphane, Mergny Jean-Louis, Lavigne Marc

DNA topoisomerase 1 represses HIV-1 promoter activity through its interaction with a guanine quadruplex present in the LTR sequence Journal Article

In: Retrovirology, vol. 20, no. 1, pp. 10, 2023, ISSN: 1742-4690.

Abstract | Links | BibTeX | Tags: MARQUET, NEGRONI, PAILLART, Unité ARN

Toccafondi Elenia, Kanja Marine, Winter Flore, Lener Daniela, Negroni Matteo

A snapshot on HIV-1 evolution through the identification of phylogenetic-specific properties of HIV-1 integrases M/O Journal Article

In: PLoS Pathog, vol. 19, no. 3, pp. e1011207, 2023, ISSN: 1553-7374.

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

2021

Omar R El, Julien E, Biasch K, Guffroy B, Lioure B, Vallat L, Gross I, Domon-Dell C, Lanza F, Gachet C, Negroni M, Freund J N, Tavian M

CDX2 regulates ACE expression in blood development and leukemia cells Journal Article

In: Blood Adv, vol. 5, no. 7, pp. 2012-2016, 2021, ISBN: 33843985, (2473-9537 (Electronic) 2473-9529 (Linking) Journal Article).

Links | BibTeX | Tags: NEGRONI, Unité ARN

Toccafondi E, Lener D, Negroni M

HIV-1 Capsid Core: A Bullet to the Heart of the Target Cell Journal Article

In: Front Microbiol, vol. 12, pp. 652486, 2021, ISBN: 33868211, (1664-302X (Print) 1664-302X (Linking) Journal Article Review).

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

Rocchi C., Louvat C., Miele A., Batisse J., Guillon C., Ballut L., Lener D., Negroni M., Ruff M., Gouet P., Fiorini F.

The HIV-1 Integrase C-Terminal domain induces TAR RNA structural changes promoting Tat binding Journal Article

In: 2021.

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

2020

Duvergé A, Negroni M

Pseudotyping Lentiviral Vectors: When the Clothes Make the Virus Journal Article

In: Viruses, vol. 12, no. 11, pp. 1311, 2020.

Abstract | Links | BibTeX | Tags: envelope proteins, gene therapy, lentiviral vectors, NEGRONI, pseudotyping, Unité ARN

Kanja M, Cappy P, Levy N, Oladosu O, Schmidt S, Rossolillo P, Winter F, Gasser R, Moog C, Ruff M, Negroni M, Lener D

NKNK: a New Essential Motif in the C-Terminal Domain of HIV-1 Group M Integrases Journal Article

In: J Virol, vol. 94, no. 20, pp. e01035-01020, 2020, ISBN: 32727879.

Abstract | Links | BibTeX | Tags: evolution human immunodeficiency virus integrase phylogenetic groups, NEGRONI, Unité ARN

2018

Smyth R P, Negroni M, Lever A M, Mak J, Kenyon J C

RNA Structure-A Neglected Puppet Master for the Evolution of Virus and Host Immunity Journal Article

In: Front Immunol, vol. 9, pp. 2097, 2018, ISBN: 30283444.

Abstract | Links | BibTeX | Tags: NEGRONI, RNA structure immune evasion secondary structure viral RNA viral evolution, Unité ARN

2017

Cappy P, Moisan A, Oliveira F De, Plantier J C, Negroni M

HIV-1 sequences in the epidemic suggest an alternative pathway for the generation of the Long Terminal Repeats Journal Article

In: Sci Rep, vol. 7, no. 1, pp. 13715, 2017, ISBN: 29057964.

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

2016

Smyth R P, Negroni M

A step forward understanding HIV-1 diversity Journal Article

In: Retrovirology, vol. 13, no. 1, pp. 27, 2016, ISBN: 27093884.

Abstract | Links | BibTeX | Tags: alternative splicing aminoacyl-tRNA synthetase enzyme kinetics mitochondria mitochondrial disease threonyl-tRNA synthetase, MARQUET, NEGRONI, PAILLART, Unité ARN

Gasser R, Hamoudi M, Pellicciotta M, Zhou Z, Visdeloup C, Colin P, Braibant M, Lagane B, Negroni M

Buffering deleterious polymorphisms in highly constrained parts of HIV-1 envelope by flexible regions. Journal Article

In: Retrovirology, vol. 13, no. 1, pp. 50, 2016.

Abstract | Links | BibTeX | Tags: Antigenic variation Coevolution Envelope HIV Viral entry, NEGRONI, Unité ARN

2015

Geller R, Domingo-Calap P, Cuevas J M, Rossolillo P, Negroni M, Sanjuán R

The external domains of the HIV-1 envelope are a mutational cold spot. Journal Article

In: Nat Commun, vol. 6, pp. 8571, 2015, ISBN: 26450412.

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

Coulibaly S T, Rossolillo P, Winter F, Kretzschmar F K, Brayé M, Martin D P, Lener D, Negroni M

Potent Sensitisation of Cancer Cells to Anticancer Drugs by a Quadruple Mutant of the Human Deoxycytidine Kinase. Journal Article

In: PLoS One, vol. 10, no. 10, pp. e0140741, 2015, ISBN: 26485161.

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

Coulibaly S, Rossolillo P, Negroni M

Mutant human deoxycytidine kinase. Miscellaneous

2015, ISBN: EP 15305545.4.

BibTeX | Tags: NEGRONI, Unité ARN

2012

Rossolillo P, Winter F, Simon-Loriere E, Gallois-Montbrun S, Negroni M

Retrovolution: HIV-Driven Evolution of Cellular Genes and Improvement of Anticancer Drug Activation Journal Article

In: PLoS Genet, vol. 8, no. 8, pp. e1002904, 2012, ISBN: 22927829.

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

Crignis E De, Guglietta S, Foley B T, Negroni M, Narzo A F Di, Costa V Waelti Da, Cavassini M, Bart P A, Pantaleo G, Graziosi C

Nonrandom distribution of cryptic repeating triplets of purines and pyrimidines (RNY)n in gp120 of HIV-1. Journal Article

In: AIDS Res Hum Retroviruses, vol. 28, no. 5, pp. :493-504, 2012, ISBN: 21902591, (NEGRONI).

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

2011

Simon-Loriere E, Rossolillo P, Negroni M

RNA structures, genomic organization and selection of recombinant HIV Journal Article

In: RNA Biol, vol. 8, no. 2, pp. 280-286, 2011, ISSN: 1555-8584 (Electronic) 1547-6286 (Linking), (Journal article RNA biology RNA Biol. 2011 Mar 1;8(2).).

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

2009

Simon-Loriere E, Galetto R, Hamoudi M, Archer J, Lefeuvre P, Martin D P, Robertson D L, Negroni M

Molecular mechanisms of recombination restriction in the envelope gene of the human immunodeficiency virus Journal Article

In: PLoS Pathog, vol. 5, no. 5, pp. e1000418, 2009, ISBN: 19424420, (1553-7374 (Electronic) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

Negroni M, Gallois-Montbrun S, Rossolillo P, Bartolo V Di, Uze G, Simon-Loriere E, Marquet R, Vivet-Boudou V

Lentiviral-based vector and its use in directed evolution of genomic regions, genes and polynucleotides. Miscellaneous

2009, ISBN: EP 09290856.5.

Abstract | BibTeX | Tags: MARQUET, NEGRONI, PAILLART, Unité ARN

Galetto R, Negroni M

Retroviruses Book Chapter

In: Cameron, C; Gotte, M; Raney, K (Ed.): Viral Genome Replication, pp. 109-128, Springer-Verlag, 2009, (DOI: 10.1007/b135974_6).

Abstract | Links | BibTeX | Tags: NEGRONI, Unité ARN

2008

Ramirez B C, Simon-Loriere E, Galetto R, Negroni M

Implications of recombination for HIV diversity Journal Article

In: Virus Res, vol. 134, no. 1-2, pp. 64-73, 2008, ISBN: 18308413, (0168-1702 (Print) 0168-1702 (Linking) Journal Article Research Support, Non-U.S. Gov't Review).

Abstract | Links | BibTeX | Tags: *Genetic Variation Genome, Genetic, NEGRONI, Unité ARN, Viral HIV/classification/*genetics/immunology/isolation & purification HIV Infections/drug therapy/immunology/transmission/virology Humans *Recombination

Archer J, Pinney J W, Fan J, Simon-Loriere E, Arts E J, Negroni M, Robertson D L

Identifying the important HIV-1 recombination breakpoints Journal Article

In: PLoS Comput Biol, vol. 4, no. 9, pp. e1000178, 2008, ISBN: 18787691, (1553-7358 (Electronic) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: Computational Biology Evolution, env Genetic Variation Genome, Genetic, Genetic Models, Molecular Genes, NEGRONI, Statistical RNA, Unité ARN, Viral HIV Infections/virology HIV-1/*genetics Humans *Models, Viral/genetics *Recombination