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Publications

2024

Gaucherand Léa, Baldaccini Morgane, Pfeffer Sébastien

Beyond RNAi: How the Dicer protein modulates the antiviral innate immune response in mammalian cells: Mammalian Dicer could regulate the innate immune response in an RNAi-independent manner as a result of losing long dsRNA processive activity Article de journal

Dans: Bioessays, p. e2400173, 2024, ISSN: 1521-1878.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Silva Elisabete Cruz Da, Gaki Paraskevi, Flieg Fabien, Messmer Melanie, Gucciardi Floriane, Markovska Yevheniia, Reisch Andreas, Fafi-Kremer Samira, Pfeffer Sébastien, Klymchenko Andrey S

Direct Zeptomole Detection of RNA Biomarkers by Ultrabright Fluorescent Nanoparticles on Magnetic Beads Article de journal

Dans: Small, p. e2404167, 2024, ISSN: 1613-6829.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Messmer Mélanie, Pierson Louison, Pasquier Charline, Djordjevic Nikola, Chicher Johana, Hammann Philippe, Pfeffer Sébastien, Girardi Erika

DEAD box RNA helicase 5 is a new pro-viral host factor for Sindbis virus infection Article de journal

Dans: Virol J, vol. 21, no. 1, p. 76, 2024, ISSN: 1743-422X.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, PPSE, Unité ARN

Baldaccini Morgane, Gaucherand Léa, Chane-Woon-Ming Béatrice, Messmer Mélanie, Gucciardi Floriane, Pfeffer Sébastien

The helicase domain of human Dicer prevents RNAi-independent activation of antiviral and inflammatory pathways Article de journal

Dans: EMBO J, 2024, ISSN: 1460-2075.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

2023

Gaucherand Lea, Iyer Amrita, Gilabert Isabel, Rycroft Chris H, Gaglia Marta M

Cut site preference allows influenza A virus PA-X to discriminate between host and viral mRNAs Article de journal

Dans: Nat Microbiol, 2023, ISSN: 2058-5276.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Girardi Erika, Messmer Mélanie, Lopez Paula, Fender Aurélie, Chicher Johana, Chane-Woon-Ming Béatrice, Hammann Philippe, Pfeffer Sébastien

Proteomics-based determination of double-stranded RNA interactome reveals known and new factors involved in Sindbis virus infection Article de journal

Dans: RNA, vol. 29, no. 3, p. 361–375, 2023, ISSN: 1469-9001.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, PPSE, Unité ARN

Lee Seungjae, Jee David, Srivastava Sid, Yang Acong, Ramidi Abhinav, Shang Renfu, Bortolamiol-Becet Diane, Pfeffer Sébastien, Gu Shuo, Wen Jiayu, Lai Eric C

Promiscuous splicing-derived hairpins are dominant substrates of tailing-mediated defense of miRNA biogenesis in mammals Article de journal

Dans: Cell Rep, vol. 42, no. 2, p. 112111, 2023, ISSN: 2211-1247.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

2022

Girardi Erika, Messmer Melanie, Lopez Paula, Fender Aurelie, Chicher Johana, Chane-Woon-Ming Beatrice, Hammann Philippe, Pfeffer Sebastien

Proteomics-based determination of double stranded RNA interactome reveals known and new factors involved in Sindbis virus infection Article de journal

Dans: RNA, vol. 29, iss. 3, p. 361-375, 2022, ISSN: 1469-9001.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, PPSE, Unité ARN

Vilimova Monika, Pfeffer Sébastien

Post-transcriptional regulation of polycistronic microRNAs Article de journal

Dans: Wiley Interdiscip Rev RNA, vol. 14, iss. 2, p. e1749, 2022, ISSN: 1757-7012.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Camara A., Lavanant A. C., Abe J., Desforges H. L., Alexandre Y. O., Girardi E., Igamberdieva Z., Asano K., Tanaka M., Hehlgans T., Pfeffer K., Pfeffer S., Mueller S. N., Stein J. V., Mueller C. G.

CD169(+) macrophages in lymph node and spleen critically depend on dual RANK and LTbetaR signaling Article de journal

Dans: Proc Natl Acad Sci U S A, vol. 119, no. 3, p. e2108540119, 2022, ISBN: 35031565, (1091-6490 (Electronic) 0027-8424 (Linking) Journal Article).

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Team-Mueller, Unité ARN

Brugier A., Hafirrassou M. L., Pourcelot M., Baldaccini M., Kril V., Couture L., Kummerer B. M., Gallois-Montbrun S., Bonnet-Madin L., Vidalain P. O., Delaugerre C., Pfeffer S., Meertens L., Amara A.

RACK1 Associates with RNA-Binding Proteins Vigilin and SERBP1 to Facilitate Dengue Virus Replication Article de journal

Dans: J Virol, vol. 96, iss. 7, p. e0196221, 2022, ISBN: 35266803, (1098-5514 (Electronic) 0022-538X (Linking) Journal Article).

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

2021

Vilimova Monika, Contrant Maud, Randrianjafy Ramy, Dumas Philippe, Elbasani Endrit, Ojala Päivi M, Pfeffer Sébastien, Fender Aurélie

Correction to 'Cis regulation within a cluster of viral microRNAs' Divers

2021, ISSN: 1362-4962.

Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Montavon T C, Baldaccini M, Lefevre M, Girardi E, Chane-Woon-Ming B, Messmer M, Hammann P, Chicher J, Pfeffer S

Human DICER helicase domain recruits PKR and modulates its antiviral activity Article de journal

Dans: PLoS Pathog, vol. 17, no. 5, p. e1009549, 2021, ISBN: 33984068, (1553-7374 (Electronic) 1553-7366 (Linking) Journal Article).

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, PPSE, Unité ARN

Vilimova M, Contrant M, Randrianjafy R, Dumas P, Elbasani E, Ojala P M, Pfeffer S, Fender A

Cis regulation within a cluster of viral microRNAs Article de journal

Dans: Nucleic Acids Res, 2021, ISBN: 34417603, (1362-4962 (Electronic) 0305-1048 (Linking) Journal Article).

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Baldaccini M., Pfeffer S.

Untangling the roles of RNA helicases in antiviral innate immunity Article de journal

Dans: PLoS Pathog, vol. 17, no. 12, p. e1010072, 2021, ISBN: 34882751, (1553-7374 (Electronic) 1553-7366 (Linking) Journal Article Review).

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

2020

Petitjean O, Girardi E, Ngondon RP, Lupashin V, Pfeffer S

Genome-Wide CRISPR-Cas9 Screen Reveals the Importance of the Heparan Sulfate Pathway and the Conserved Oligomeric Golgi Complex for Synthetic Double-Stranded RNA Uptake and Sindbis Virus Infection Article de journal

Dans: mSphere, vol. 5, no. 6, p. e00914-20, 2020.

Résumé | Liens | BibTeX | Étiquettes: complex oligomeric Golgi complex, CRISPR-Cas9 screen, double-stranded RNA, heparan-sulfate, PFEFFER, Transfection, Unité ARN, virus

Lopez P, Girardi E, Mounce B C, Weiss A, Chane-Woon-Ming B, Messmer M, Kaukinen P, Kopp A, Bortolamiol-Becet D, Fendri A, Vignuzzi M, Brino L, Pfeffer S

High-throughput Fluorescence-Based Screen Identifies the Neuronal microRNA miR-124 as a Positive Regulator of Alphavirus Infection Article de journal

Dans: J Virol, vol. 94, no. 9, p. e02145-02119, 2020, ISBN: 32102877.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Herzog K, Bandiera S, Pernot S, Fauvelle C, Jühling F, Weiss A, Bull A, Durand S C, Chane-Woon-Ming B, Pfeffer S, Mercey M, Lerat H, Meunier J C, Raffelsberger W, Brino L, Baumert T F, Zeisel M B

Functional microRNA screen uncovers O-linked N-acetylglucosamine transferase as a host factor modulating hepatitis C virus morphogenesis and infectivity Article de journal

Dans: Gut, vol. 69, no. 2, p. 380-392, 2020, ISBN: 31076402.

Résumé | Liens | BibTeX | Étiquettes: HCV hepatitis C hepatocyte molecular mechanisms, PFEFFER, Unité ARN

Girardi E, Pfeffer S, Baumert T F, Majzoub K

Roadblocks and fast tracks: How RNA binding proteins affect the viral RNA journey in the cell Article de journal

Dans: Semin Cell Dev Biol, vol. S1084-9521, no. 20, p. 30091-4, 2020, ISBN: 32847707.

Résumé | Liens | BibTeX | Étiquettes: Innate Immunity RNA biology RNA viruses Technology Viral RNA sensing Viral Translation Virology., PFEFFER, Unité ARN

Ghosh S, Guimaraes J C, Lanzafame M, Schmidt A, Syed A P, Dimitriades B, Börsch A, Ghosh S, Mittal N, Montavon T, Correia A L, Danner J, Meister G, Terracciano L M, Pfeffer S, Piscuoglio S, Zavolan M

Prevention of dsRNA-induced interferon signaling by AGO1x is linked to breast cancer cell proliferation Article de journal

Dans: EMBO J, p. in press, 2020, ISBN: 32812257.

Résumé | Liens | BibTeX | Étiquettes: Argonaute 1 breast cancer endogenous dsRNA interferon response translation readthrough, PFEFFER, Unité ARN

2019

Spaety M E, Gries A, Badie A, Venkatasamy A, Romain B, Orvain C, Yanagihara K, Okamoto K, Jung A C, Mellitzer G, Pfeffer S, Gaiddon C

HDAC4 Levels Control Sensibility toward Cisplatin in Gastric Cancer via the p53-p73/BIK Pathway Article de journal

Dans: Cancers (Basel), vol. 11, no. 11, p. 1747, 2019, ISBN: 31703394.

Résumé | Liens | BibTeX | Étiquettes: BIK HDAC4 cisplatin gastric cancer miR-140 p53 p73, PFEFFER, Unité ARN

Lopez P, Girardi E, Pfeffer S

[Importance of cellular microRNAs in the regulation of viral infections] Article de journal

Dans: Med Sci (Paris), vol. 35, no. 8-9, p. 667-673, 2019, ISBN: 31532379.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

2018

Olivier Petitjean Thomas Montavon, Pfeffer Sébastien

To have and have not, RNA interference as an antiviral defense system in mammals Article de journal

Dans: Virologie (Montrouge), vol. 22, no. 5, p. 251-260, 2018, ISSN: 33111686 .

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Girardi E, López P, Pfeffer S

On the Importance of Host MicroRNAs During Viral Infection Article de journal

Dans: Front Genet, vol. 9, p. 439, 2018, ISBN: 30333857.

Résumé | Liens | BibTeX | Étiquettes: defense mechanism host–pathogen interaction microRNA post-transcriptional regulation virus, PFEFFER, Unité ARN

Creugny A, Fender A, Pfeffer S

Regulation of primary-microRNA processing Article de journal

Dans: FEBS Lett, vol. 592, no. 12, p. 1980-1996, 2018, ISBN: 29683487.

Résumé | Liens | BibTeX | Étiquettes: Drosha biogenesis microRNA regulation, PFEFFER, Unité ARN

Bortolamiol-Bécet D, Monsion B, Chapuis S, Hleibieh K, Scheidecker D, Alioua A, Bogaert F, Revers F, Brault V, Ziegler-Graff V

Phloem-Triggered Virus-Induced Gene Silencing Using a Recombinant Polerovirus Article de journal

Dans: Front Microbiol, vol. 9, p. 2449, 2018, ISBN: 30405546.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN, VIGS phloem polerovirus suppressor of RNA silencing visual monitoring of infection

2016

Alsaleh G, Nehmar R, Blüml S, Schleiss C, Ostermann E, Dillenseger J P, Sayeh A, Choquet P, Dembele D, Francois A, Salmon J H, Paul N, Schabbauer G, Bierry G, Meyer A, Gottenberg J E, Haas G, Pfeffer S, Vallat L, Sibilia J, Bahram S, Georgel P

Reduced DICER1 expression bestows rheumatoid arthritis synoviocytes proinflammatory properties and resistance to apoptotic stimuli. Article de journal

Dans: Arthritis Rheumatol, vol. 68, no. 8, p. 1839-1848, 2016, ISBN: 26882526.

Résumé | Liens | BibTeX | Étiquettes: DICER1 inflammation microRNA rheumatoid arthritis, PFEFFER, Unité ARN

Haas G, Cetin S, Messmer M, Chane-Woon-Ming B, Terenzi O, Chicher J, Kuhn L, Hammann P, Pfeffer S

Identification of factors involved in target RNA-directed microRNA degradation. Article de journal

Dans: Nucleic Acids Res, vol. 44, no. 6, p. 2873-2887, 2016, ISBN: 26809675.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, PPSE, Unité ARN

Haar J, Contrant M, Bernhardt K, Feederle R, Diederichs S, Pfeffer S, Delecluse H J

The expression of a viral microRNA is regulated by clustering to allow optimal B cell transformation. Article de journal

Dans: Nucleic Acids Res, vol. 44, no. 3, p. 1326-1341, 2016, ISBN: 26635399.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

2015

Sorel O, Tuddenham L, Myster F, Palmeira L, Kerkhofs P, Pfeffer S, Vanderplasschen A, Dewals B G

Small RNA deep sequencing identifies viral microRNAs during malignant catarrhal fever induced by alcelaphine herpesvirus 1. Article de journal

Dans: J Gen Virol, vol. 96, no. 11, p. 3360-3372, 2015, ISBN: 26329753.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Oussaief L, Fendri A, Chane-Woon-Ming B, Poirey R, Delecluse H J, Joab I, Pfeffer S

Modulation of the microRNA cluster miR-183-96-182 expression by the Epstein-Barr virus latent membrane protein 1. Article de journal

Dans: J Virol, vol. 89, no. 23, p. 12178-12188, 2015, ISBN: 26401047.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Mailly L, Xiao F, Lupberger J, Wilson G K, Aubert P, Duong F H, Calabrese D, Leboeuf C, Fofana I, Thumann C, Bandiera S, Lütgehetmann M, Volz T, Davis C, Harris H J, Mee C J, Girardi E, Chane-Woon-Ming B, Ericsson M, Fletcher N, Bartenschlager R, Pessaux P, Vercauteren K, Meuleman P, Villa P, Kaderali L, Pfeffer S, Heim M H, Neunlist M, Zeisel M B, Dandri M, McKeating J A, Robinet E, Baumert T F

Clearance of persistent hepatitis C virus infection in humanized mice using a claudin-1-targeting monoclonal antibody. Article de journal

Dans: Nat Biotechnol, vol. 33, no. 5, p. 549-554, 2015, ISBN: 25798937.

Résumé | Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

Girardi E, Lefèvre M, Chane-Woon-Ming B, Paro S, Claydon B, Imler JL, Meignin C, Pfeffer S

Cross-species comparative analysis of Dicer proteins during Sindbis virus infection. Article de journal

Dans: Sci Rep, vol. 5, p. 10693, 2015, ISBN: 26024431.

Résumé | Liens | BibTeX | Étiquettes: meignin, PFEFFER, Unité ARN

Bandiera S, Pfeffer S, Baumert T F, Zeisel M B

miR-122 - a key factor and therapeutic target in liver disease. Article de journal

Dans: J Hepatol, vol. 62, no. 2, p. 448-457, 2015, ISBN: 25308172.

Résumé | Liens | BibTeX | Étiquettes: HBV HCC HCV Hepatitis Liver disease pathogenesis miR-122, PFEFFER, Unité ARN

2014

Stik G, Muylkens B, Coupeau D, Laurent S, Dambrine G, Messmer M, Chane-Woon-Ming B, Pfeffer S, Rasschaert D

Small RNA cloning and sequencing strategy affects host and viral microRNA expression signatures Article de journal

Dans: J Biotechnol, vol. 181, p. 35-44, 2014, ISBN: 24746587.

Résumé | Liens | BibTeX | Étiquettes: Marek's disease virus MicroRNA Small RNA cloning and sequencing Viral infection, PFEFFER, Unité ARN

Pfeffer S

Herpesviruses Encode Their Own MicroRNAs. Article de journal

Dans: Clin Chem, vol. 60, no. 5, p. 791-792, 2014, ISBN: 24778302.

Liens | BibTeX | Étiquettes: PFEFFER, Unité ARN

2012

Tuddenham L, Jung J S, Chane-Woon-Ming B, Dölken L, Pfeffer S

Small RNA deep-sequencing identifies microRNAs and other small non-coding RNAs from human herpesvirus 6 (HHV-6B). Article de journal

Dans: J Virol, vol. 86, p. 1638-1649, 2012, ISBN: 22114334, (Published ahead of print 23 November 2011).

Résumé | Liens | BibTeX | Étiquettes: MicroRNA Roseolovirus HHV-6 Sup-T-1 OriLyt, PFEFFER, Unité ARN