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Geissmann T, Chevalier C, Cros M J, Boisset S, Fechter P, Noirot C, Schrenzel J, Francois P, Vandenesch F, Gaspin C, Romby P

A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation Article de journal

Dans: Nucleic Acids Res, vol. 37, no. 21, p. 7239-7257, 2009, ISBN: 19786493, (1362-4962 (Electronic) 0305-1048 (Linking) Journal Article Research Support, Non-U.S. Gov't).

Résumé | Liens | BibTeX | Étiquettes: Bacillus subtilis/genetics/metabolism Base Sequence Computational Biology Conserved Sequence Gene Expression Profiling *Gene Expression Regulation, Bacterial Molecular Sequence Data Proteomics RNA Stability RNA, Genetic, Messenger/metabolism RNA, ROMBY, Unité ARN, Untranslated/*chemistry/genetics/metabolism Staphylococcus aureus/*genetics Transcription

Frechin M, Duchene A M, Becker H D

Translating organellar glutamine codons: a case by case scenario? Article de journal

Dans: RNA Biol, vol. 6, no. 1, p. 31-34, 2009, ISBN: 19106621, (1555-8584 (Electronic) Journal Article Research Support, Non-U.S. Gov't Review).

Résumé | Liens | BibTeX | Étiquettes: Biological Nitrogenous Group Transferases/metabolism Plants/metabolism RNA, KERN Amino Acyl-tRNA Synthetases/metabolism Animals Chloroplasts/metabolism Codon Cytosol/metabolism Glutamate-tRNA Ligase/metabolism Glutamine/*chemistry Mitochondria/metabolism Models, Messenger/metabolism RNA, Transfer/metabolism, Unité ARN


Mathy N, Pellegrini O, Serganov A, Patel D J, Ehresmann C, Portier C

Specific recognition of rpsO mRNA and 16S rRNA by Escherichia coli ribosomal protein S15 relies on both mimicry and site differentiation Article de journal

Dans: Mol Microbiol, vol. 52, no. 3, p. 661-675, 2004, ISBN: 15101974, (0950-382x Journal Article).

Résumé | Liens | BibTeX | Étiquettes: 16S/chemistry/genetics/*metabolism Recombinant Fusion Proteins/metabolism Ribosomal Proteins/chemistry/*genetics/*metabolism Sequence Alignment Support, Bacterial Models, EHRESMANN Amino Acid Sequence Base Sequence Escherichia coli Proteins/chemistry/genetics/*metabolism Gene Expression Regulation, Messenger/metabolism RNA, Molecular *Molecular Mimicry Molecular Sequence Data Mutagenesis, Non-U.S. Gov't Support, P.H.S., Ribosomal, Secondary RNA, Site-Directed Nucleic Acid Conformation Protein Structure, U.S. Gov't, Unité ARN

Dubois D Y, Blaise M, Becker H D, Campanacci V, Keith G, Giege R, Cambillau C, Lapointe J, Kern D

An aminoacyl-tRNA synthetase-like protein encoded by the Escherichia coli yadB gene glutamylates specifically tRNAAsp Article de journal

Dans: Proc Natl Acad Sci U S A, vol. 101, no. 20, p. 7530-7535, 2004, ISBN: 15096594, (0027-8424 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Asp/*metabolism Support, KERN GIEGE Amino Acyl-tRNA Ligases/chemistry/genetics/*metabolism Crystallography, Messenger/metabolism RNA, Non-U.S. Gov't, Tertiary RNA, Transfer, Unité ARN, X-Ray Escherichia coli/enzymology/genetics/*metabolism Escherichia coli Proteins/chemistry/genetics/*metabolism Glutamic Acid/*metabolism Peptide Elongation Factor 2/metabolism Phylogeny Protein Structure


Wilhelm F X, Wilhelm M, Gabriel A

Extension and cleavage of the polypurine tract plus-strand primer by Ty1 reverse transcriptase Article de journal

Dans: J Biol Chem, vol. 278, no. 48, p. 47678-47684, 2003, ISBN: 14500728, (0021-9258 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Sequence DNA/chemistry DNA Primers DNA Replication Models, Calf Thymus/chemistry Support, Genetic, Genetic Molecular Sequence Data Purines/*chemistry RNA/chemistry RNA, Messenger/metabolism RNA, Non-U.S. Gov't Support, P.H.S. Templates, U.S. Gov't, Unité ARN, Viral RNA-Directed DNA Polymerase/*chemistry Recombinant Proteins/chemistry Retroelements/*genetics Ribonuclease H

Ryckelynck M, Giege R, Frugier M

Yeast tRNA(Asp) charging accuracy is threatened by the N-terminal extension of aspartyl-tRNA synthetase Article de journal

Dans: J Biol Chem, vol. 278, no. 11, p. 9683-9690, 2003, ISBN: 12486031, (0021-9258 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Motifs Aspartate-tRNA Ligase/*metabolism Aspartic Acid/chemistry Base Sequence Codon Escherichia coli/metabolism Kinetics Molecular Sequence Data Nucleic Acid Conformation Nucleic Acids/chemistry Protein Structure, Asp/*chemistry Support, FRUGIER, Messenger/metabolism RNA, Non-U.S. Gov't Yeasts/metabolism, Secondary Protein Structure, Tertiary RNA, Transfer, Unité ARN

Frugier M, Giege R

Yeast aspartyl-tRNA synthetase binds specifically its own mRNA Article de journal

Dans: J Mol Biol, vol. 331, no. 2, p. 375-383, 2003, ISBN: 12888345, (0022-2836 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: 5' Untranslated Regions Amino Acid Motifs Aspartate-tRNA Ligase/*chemistry/metabolism Binding, Competitive Blotting, Drug Gene Expression Regulation, Enzymologic Genes, FRUGIER, Fungal Kinetics Luminescent Proteins/metabolism Plasmids Protein Binding Protein Structure, Messenger/metabolism RNA, Non-U.S. Gov't, Tertiary RNA/metabolism RNA, Transfer/metabolism Saccharomyces cerevisiae/metabolism Support, Unité ARN, Western Dose-Response Relationship

Caillet J, Nogueira T, Masquida B, Winter F, Graffe M, Dock-Bregeon A C, Torres-Larios A, Sankaranarayanan R, Westhof E, Ehresmann B, Ehresmann C, Romby P, Springer M

The modular structure of Escherichia coli threonyl-tRNA synthetase as both an enzyme and a regulator of gene expression Article de journal

Dans: Mol Microbiol, vol. 47, no. 4, p. 961-974, 2003, ISBN: 12581352, (0950-382x Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acyl/chemistry/metabolism Ribosomes/metabolism Support, Bacterial Genes, Bacterial Macromolecular Systems Models, Bacterial/chemistry/metabolism RNA, Binding Sites Binding, Competitive Escherichia coli/*enzymology/*genetics Evolution, Messenger/metabolism RNA, Molecular Gene Expression Regulation, Molecular Molecular Mimicry Molecular Structure Mutation Operator Regions (Genetics) Protein Structure, Non-U.S. Gov't Threonine-tRNA Ligase/*chemistry/genetics/*metabolism, ROMBY, Tertiary Protein Subunits RNA, Transfer, Unité ARN, WESTHOF


Lescure A, Fagegaltier D, Carbon P, Krol A

Protein factors mediating selenoprotein synthesis Article de journal

Dans: Curr Protein Pept Sci, vol. 3, no. 1, p. 143-151, 2002, ISBN: 12370018, (1389-2037 Journal Article Review Review, Tutorial).

Résumé | Liens | BibTeX | Étiquettes: Bacterial Proteins/genetics/*metabolism Guanosine Triphosphate/metabolism Models, Biological Peptide Elongation Factors/*metabolism Protein Binding Proteins/*biosynthesis RNA, LESCURE, Messenger/metabolism RNA, Transfer/metabolism RNA-Binding Proteins/*metabolism, Unité ARN


Kolb F A, Malmgren C, Westhof E, Ehresmann C, Ehresmann B, Wagner E G, Romby P

An unusual structure formed by antisense-target RNA binding involves an extended kissing complex with a four-way junction and a side-by-side helical alignment Article de journal

Dans: RNA, vol. 6, no. 3, p. 311-324, 2000, ISBN: 10744017, (1355-8382 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Antisense/*metabolism RNA, Bacterial Proteins/*metabolism Base Pairing Base Sequence Binding Sites Cations, Divalent Computer Simulation Metals, Double-Stranded/metabolism RNA, Heavy/metabolism Models, Messenger/metabolism RNA, Molecular Molecular Sequence Data *Nucleic Acid Conformation RNA Stability RNA, Non-U.S. Gov't, ROMBY, Spliced Leader/metabolism Support, Unité ARN