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2002

Goldschmidt V, Rigourd M, Ehresmann C, Grice S F Le, Ehresmann B, Marquet R

Direct and indirect contributions of RNA secondary structure elements to the initiation of HIV-1 reverse transcription Article de journal

Dans: J Biol Chem, vol. 277, no. 45, p. 43233-43242, 2002, ISBN: 12194974, (0021-9258 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Sequence DNA Primers DNA Replication HIV-1/*genetics HIV-1 Reverse Transcriptase/*metabolism Human Kinetics Polymerase Chain Reaction RNA, Genetic, Lys/genetics RNA, MARQUET, Non-U.S. Gov't Transcription, Transfer, Unité ARN, Viral/*chemistry/*genetics/metabolism Support

Brule F, Marquet R, Rong L, Wainberg M A, Roques B P, Grice S F Le, Ehresmann B, Ehresmann C

Structural and functional properties of the HIV-1 RNA-tRNA(Lys)3 primer complex annealed by the nucleocapsid protein: comparison with the heat-annealed complex Article de journal

Dans: RNA, vol. 8, no. 1, p. 8-15, 2002, ISBN: 11873759, (1355-8382 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Genetic, Genetic Transcription, Lys/*chemistry/genetics/metabolism RNA, MARQUET, Non-U.S. Gov't Templates, Transfer, Unité ARN, Viral/*chemistry/genetics/metabolism Support

2001

Carnicelli D., Brigotti M., Rizzi S., Keith G., Montanaro L., Sperti S.

Nucleotides U28-A42 and A37 in unmodified yeast tRNA(Trp) as negative identity elements for bovine tryptophanyl-tRNA synthetase Article de journal

Dans: FEBS Lett, vol. 492, no. 3, p. 238-41, 2001, (0014-5793 Journal Article).

Résumé | BibTeX | Étiquettes: Acid, Adenine/chemistry, Animals, Base, Cattle, cerevisiae/genetics, Conformation, Data, Fungal/genetics/metabolism, Gov't, Kinetics, Ligase/*metabolism, Molecular, Non-U.S., Nucleic, RNA, Saccharomyces, Sequence, Species, Specificity, Substrate, Support, Transfer, Trp/chemistry/*metabolism, Tryptophan-tRNA, Uridine/chemistry

Senger B, Despons L, Walter P, Jakubowski H, Fasiolo F

Yeast cytoplasmic and mitochondrial methionyl-tRNA synthetases: two structural frameworks for identical functions Article de journal

Dans: J Mol Biol, vol. 311, no. 1, p. 205-216, 2001, ISBN: 11469869, (0022-2836 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Acylation Amino Acid Sequence Binding Sites Coenzyme A/metabolism Comparative Study Cysteine/genetics/metabolism Cytoplasm/*enzymology Genes, Fungal/genetics Genetic Complementation Test Homocysteine/genetics/metabolism Kinetics Methionine/metabolism Methionine-tRNA Ligase/*chemistry/genetics/*metabolism Mitochondria/*enzymology Molecular Sequence Data Mutation/genetics Protein Transport RNA, Met/genetics/metabolism Saccharomyces cerevisiae/cytology/*enzymology/genetics Sequence Alignment Structure-Activity Relationship Support, Non-P.H.S. Zinc/metabolism Zinc Fingers/genetics/physiology, Non-U.S. Gov't Support, Transfer, U.S. Gov't, Unité ARN

Schiffer S, Helm M, Théobald-Dietrich A, Giege R, Marchfelder A

The plant tRNA 3' processing enzyme has a broad substrate spectrum Article de journal

Dans: Biochemistry, vol. 40, no. 28, p. 8264-8272, 2001, ISBN: 11444972, (0006-2960 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Non-U.S. Gov't, Plant/genetics/*metabolism RNA, Post-Transcriptional RNA, Transfer, Tyr/genetics/*metabolism Substrate Specificity/genetics Support, Unité ARN

2000

Delagoutte B., Keith G., Moras D., Cavarelli J.

Crystallization and preliminary X-ray crystallographic analysis of yeast arginyl-tRNA synthetase-yeast tRNAArg complexes Article de journal

Dans: Acta Crystallogr D Biol Crystallogr, vol. 56, no. Pt 4, p. 492-4, 2000, (0907-4449 Journal Article).

Résumé | BibTeX | Étiquettes: &, Arg/*chemistry/isolation, Arginine-tRNA, cerevisiae/enzymology/genetics, Crystallization, Crystallography, Fungal/chemistry/isolation, Gov't, Ligase/*chemistry/isolation, Non-U.S., purification/*metabolism, purification/metabolism, RNA, Saccharomyces, Support, Transfer, X-Ray

Zenkova M A, Vlasov A V, Konevets D A, Sil'nikov V N, Giege R, Vlasov V V

[Chemical ribonucleases. 2. Design and hydrolytic properties RNase mimetics based on diazabicyclo[2.2.2]octane with various positive charges] Article de journal

Dans: Bioorg Khim, vol. 26, no. 9, p. 679-685, 2000, ISBN: 11036527, (0132-3423 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Bicyclo Compounds, Heterocyclic/*chemical synthesis/chemistry Catalysis Cations, Lys/chemistry/genetics Ribonucleases/*chemistry Structure-Activity Relationship, Monovalent/chemistry Drug Design English Abstract Human Hydrolysis Imidazoles/*chemical synthesis/chemistry Magnesium/chemistry Mitochondria/chemistry Molecular Mimicry Point Mutation RNA, Transfer, Unité ARN

Wittberger D, Berens C, Hammann C, Westhof E, Schroeder R

Evaluation of uranyl photocleavage as a probe to monitor ion binding and flexibility in RNAs Article de journal

Dans: J Mol Biol, vol. 300, no. 2, p. 339-352, 2000, ISBN: 10873469, (0022-2836 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Animals Base Pairing Base Sequence Ethylnitrosourea/metabolism Hepatitis Delta Virus/genetics Hydrogen Peroxide/metabolism Introns/genetics Ions/metabolism Iron/metabolism Lead/metabolism Magnesium Chloride/pharmacology Models, Asp/chemistry/genetics/metabolism RNA, Catalytic/chemistry/genetics/metabolism RNA, Fungal/chemistry/genetics/metabolism RNA, Molecular Molecular Sequence Data *Nucleic Acid Conformation *Photolysis/drug effects Pliability RNA/*chemistry/genetics/*metabolism RNA, Non-U.S. Gov't Tetrahymena/genetics Uranyl Nitrate/*metabolism Yeasts/genetics, Phe/chemistry/genetics/metabolism RNA, Protozoan/chemistry/genetics/metabolism RNA, Transfer, Unité ARN, Viral/chemistry/genetics/metabolism Solvents Support

Wientges J, Putz J, Giege R, Florentz C, Schwienhorst A

Selection of viral RNA-derived tRNA-like structures with improved valylation activities Article de journal

Dans: Biochemistry, vol. 39, no. 20, p. 6207-6218, 2000, ISBN: 10821696, (0006-2960 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: 3' Untranslated Regions Acylation Anticodon/chemistry Base Sequence Cloning, FLORENTZ, Molecular Gene Library Kinetics Molecular Sequence Data Nucleic Acid Conformation Oligonucleotides/chemistry RNA, Non-U.S. Gov't Tymovirus/enzymology/genetics Valine-tRNA Ligase/chemistry Variation (Genetics), RNA Support, Transfer, Unité ARN, Val/*chemistry RNA, Viral/*chemistry Sequence Analysis

Tisne C, Rigourd M, Marquet R, Ehresmann C, Dardel F

NMR and biochemical characterization of recombinant human tRNA(Lys)3 expressed in Escherichia coli: identification of posttranscriptional nucleotide modifications required for efficient initiation of HIV-1 reverse transcription Article de journal

Dans: RNA, vol. 6, no. 10, p. 1403-1412, 2000, ISBN: 11073216, (1355-8382 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Sequence DNA, Biomolecular *Nucleic Acid Conformation RNA/*chemistry/genetics/metabolism RNA, Genetic Transcription, Genetic/*genetics Virus Replication, Lys/*chemistry/genetics/metabolism Structure-Activity Relationship Support, MARQUET, Molecular Molecular Sequence Data Mutation/genetics Nuclear Magnetic Resonance, Non-U.S. Gov't Templates, Transfer, Unité ARN, Viral/biosynthesis/genetics Escherichia coli/genetics *Genetic Engineering HIV-1/*genetics/physiology Human Iodine/metabolism Models

Schaub M, Krol A, Carbon P

Structural organization of Staf-DNA complexes Article de journal

Dans: Nucleic Acids Res, vol. 28, no. 10, p. 2114-2121, 2000, ISBN: 10773080, (1362-4962 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Sequence Animals Base Sequence Binding Sites DNA-Binding Proteins/*chemistry/*metabolism Human Models, Amino Acid-Specific/*genetics Support, Genetic Trans-Activators/*chemistry/*metabolism Vertebrates Xenopus laevis Zinc Fingers, Molecular Molecular Sequence Data Nucleic Acid Conformation Plasmids/*chemistry/*metabolism Protein Conformation RNA, Non-U.S. Gov't Templates, Small Nuclear/*genetics RNA, Transfer, Unité ARN

Sauter C, Lorber B, Cavarelli J, Moras D, Giege R

The free yeast aspartyl-tRNA synthetase differs from the tRNA(Asp)-complexed enzyme by structural changes in the catalytic site, hinge region, and anticodon-binding domain Article de journal

Dans: J Mol Biol, vol. 299, no. 5, p. 1313-1324, 2000, ISBN: 10873455, (0022-2836 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Anticodon/chemistry/genetics/*metabolism Aspartate-tRNA Ligase/*chemistry/genetics/*metabolism Binding Sites Catalytic Domain Conserved Sequence/genetics Crystallization Crystallography, Asp/chemistry/genetics/*metabolism Rotation Sequence Deletion/genetics Support, Fungal/chemistry/genetics/metabolism RNA, Molecular Molecular Sequence Data Movement Nucleic Acid Conformation Protein Structure, Non-U.S. Gov't Yeasts/*enzymology/genetics, Secondary RNA, Transfer, Unité ARN, X-Ray Models

Petyuk V A, Giege R, Vlasov V V, Zenkova M A

[Mechanism of oligonucleotide hybridization with the 3'-terminal region of yeast tRNA(Phe)] Article de journal

Dans: Mol Biol (Mosk), vol. 34, no. 5, p. 879-886, 2000, ISBN: 11033816, (0026-8984 Journal Article).

Liens | BibTeX | Étiquettes: Base Sequence DNA Primers Electrophoresis, Phe/chemistry/*genetics, Polyacrylamide Gel Nucleic Acid Conformation Nucleic Acid Hybridization RNA, Transfer, Unité ARN

Petyuk V, Serikov R, Tolstikov V, Potapov V, Giege R, Zenkova M, Vlassov V

Invasion of strongly binding oligonucleotides into tRNA structure Article de journal

Dans: Nucleosides Nucleotides Nucleic Acids, vol. 19, no. 7, p. 1145-1158, 2000, ISBN: 10999254, (1525-7770 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: 2-Aminopurine/*analogs & derivatives/chemistry 5-Methylcytosine Cytosine/analogs & derivatives/chemistry Deoxyuridine/*analogs & derivatives/chemistry Electrophoresis, Non-U.S. Gov't Time Factors Yeasts/chemistry, Phe/*chemistry/metabolism Support, Polyacrylamide Gel Kinetics Nucleic Acid Conformation Oligodeoxyribonucleotides/chemistry Oligonucleotides/*metabolism RNA, Transfer, Unité ARN

Lanchy J M, Isel C, Keith G, Grice S F Le, Ehresmann C, Ehresmann B, Marquet R

Dynamics of the HIV-1 reverse transcription complex during initiation of DNA synthesis Article de journal

Dans: J Biol Chem, vol. 275, no. 16, p. 12306-12312, 2000, ISBN: 10766870, (0021-9258 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: *Anticodon Base Sequence *DNA Replication *Hiv-1 Human Molecular Sequence Data Mutagenesis Nucleic Acid Conformation RNA, Genetic, Lys/genetics/metabolism RNA, MARQUET, Non-U.S. Gov't Templates, Transfer, Unité ARN, Viral/genetics/metabolism RNA-Directed DNA Polymerase/*metabolism Support

Helm M, Brule H, Friede D, Giege R, Putz D, Florentz C

Search for characteristic structural features of mammalian mitochondrial tRNAs Article de journal

Dans: RNA, vol. 6, no. 10, p. 1356-1379, 2000, ISBN: 11073213, (1355-8382 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Acylation Animals Base Pairing Base Sequence *Computational Biology Escherichia coli/genetics Genome Human Molecular Sequence Data Multigene Family *Nucleic Acid Conformation RNA/*chemistry/genetics RNA Stability RNA, Amino Acid-Specific/*chemistry/genetics Regulatory Sequences, FLORENTZ, Non-U.S. Gov't Variation (Genetics), Nucleic Acid/genetics Support, Transfer, Unité ARN

Giege R, Felden B, Zenkova M A, Sil'nikov V N, Vlassov V V

Cleavage of RNA with synthetic ribonuclease mimics Article de journal

Dans: Methods Enzymol, vol. 318, p. 147-165, 2000, ISBN: 10889986, (0076-6879 Journal Article).

Liens | BibTeX | Étiquettes: Asp/chemistry Ribonuclease, Base Sequence Electrophoresis, Chemical Molecular Sequence Data Nucleic Acid Conformation Nucleic Acid Hybridization Phosphorylation Plasmids/metabolism RNA/chemistry/*metabolism RNA, Non-U.S. Gov't, Pancreatic/chemistry/pharmacology Ribonucleases/*chemistry/pharmacology Saccharomyces cerevisiae/genetics Spectrophotometry Support, Polyacrylamide Gel Genetic Techniques Hydrolysis Imidazoles/pharmacology Models, Transfer, Unité ARN

Fechter P, Rudinger-Thirion J, Théobald-Dietrich A, Giege R

Identity of tRNA for yeast tyrosyl-tRNA synthetase: tyrosylation is more sensitive to identity nucleotides than to structural features Article de journal

Dans: Biochemistry, vol. 39, no. 7, p. 1725-1733, 2000, ISBN: 10677221, (0006-2960 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Acylation Anticodon/chemistry/metabolism Base Sequence Escherichia coli/enzymology/genetics Heat Methanococcus/enzymology/genetics Molecular Mimicry Molecular Sequence Data Nucleic Acid Denaturation RNA Processing, Fungal/chemistry/*metabolism RNA, Non-U.S. Gov't Tyrosine/chemistry/*metabolism Tyrosine-tRNA Ligase/chemistry/*metabolism, Post-Transcriptional RNA, Transfer, Tyr/chemistry/*metabolism Saccharomyces cerevisiae/*enzymology/genetics Structure-Activity Relationship Support, Unité ARN

Fagegaltier D, Hubert N, Yamada K, Mizutani T, Carbon P, Krol A

Characterization of mSelB, a novel mammalian elongation factor for selenoprotein translation Article de journal

Dans: EMBO J, vol. 19, no. 17, p. 4796-4805, 2000, ISBN: 10970870, (0261-4189 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Support, Amino Acid Sequence Animals Bacterial Proteins/chemistry/*metabolism/physiology Caenorhabditis elegans/genetics Drosophila/genetics Hela Cells Human Mice Molecular Sequence Data Peptide Elongation Factors/chemistry/*metabolism/physiology Protein Binding Proteins/*genetics RNA, Amino Acyl/metabolism Sequence Homology, Genetic/*physiology, Non-U.S. Gov't Translation, Transfer, Unité ARN

Dock-Bregeon A, Sankaranarayanan R, Romby P, Caillet J, Springer M, Rees B, Francklyn C S, Ehresmann C, Moras D

Transfer RNA-mediated editing in threonyl-tRNA synthetase. The class II solution to the double discrimination problem Article de journal

Dans: Cell, vol. 103, no. 6, p. 877-884, 2000, ISBN: 11136973, (0092-8674 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Acylation Amino Acid Activation Binding Sites Crystallography, Amino Acyl/chemistry/*metabolism Serine/metabolism Support, Molecular Mutation *Nucleic Acid Conformation Protein Structure, Non-U.S. Gov't Threonine/metabolism Threonine-tRNA Ligase/*chemistry/*genetics/metabolism Zinc/metabolism, ROMBY, Tertiary *RNA Editing RNA, Transfer, Unité ARN, X-Ray Kinetics Models

Delagoutte B, Keith G, Moras D, Cavarelli J

Crystallization and preliminary X-ray crystallographic analysis of yeast arginyl-tRNA synthetase-yeast tRNAArg complexes Article de journal

Dans: Acta Crystallogr D Biol Crystallogr, vol. 56, no. Pt 4, p. 492-494, 2000, ISBN: 10739930, (0907-4449 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Arg/*chemistry/isolation & purification/*metabolism Saccharomyces cerevisiae/enzymology/genetics Support, Arginine-tRNA Ligase/*chemistry/isolation & purification/*metabolism Crystallization Crystallography, Fungal/chemistry/isolation & purification/metabolism RNA, Non-U.S. Gov't, Transfer, Unité ARN, X-Ray RNA

Brule F, Bec G, Keith G, Grice S F Le, Roques B P, Ehresmann B, Ehresmann C, Marquet R

In vitro evidence for the interaction of tRNA(3)(Lys) with U3 during the first strand transfer of HIV-1 reverse transcription Article de journal

Dans: Nucleic Acids Res, vol. 28, no. 2, p. 634-640, 2000, ISBN: 10606665, (1362-4962 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Sequence HIV-1 Reverse Transcriptase/*metabolism Nucleic Acid Conformation Polymerase Chain Reaction RNA, Genetic, Lys/*metabolism RNA, MARQUET, Non-U.S. Gov't *Transcription, Transfer, Unité ARN, Viral/chemistry/*metabolism Support

Benas P, Bec G, Keith G, Marquet R, Ehresmann C, Ehresmann B, Dumas P

The crystal structure of HIV reverse-transcription primer tRNA(Lys,3) shows a canonical anticodon loop Article de journal

Dans: RNA, vol. 6, no. 10, p. 1347-1355, 2000, ISBN: 11073212, (1355-8382 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Animals Anticodon/*chemistry/genetics Base Sequence Cattle Chickens/*genetics Crystallography, Biomolecular *Nucleic Acid Conformation RNA/*chemistry/genetics RNA, Lys/*chemistry/genetics Rabbits Support, MARQUET, Molecular Molecular Sequence Data Nuclear Magnetic Resonance, Non-U.S. Gov't, Transfer, Unité ARN, X-Ray HIV-1/*genetics Models

Becker H D, Roy H, Moulinier L, Mazauric M H, Keith G, Kern D

Thermus thermophilus contains an eubacterial and an archaebacterial aspartyl-tRNA synthetase Article de journal

Dans: Biochemistry, vol. 39, no. 12, p. 3216-3230, 2000, ISBN: 10727213, (0006-2960 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Support, Asn/genetics/metabolism RNA, Asp/metabolism Sequence Alignment Sequence Homology, Molecular Consensus Sequence Escherichia coli/enzymology/genetics Human Kinetics Molecular Sequence Data Peptide Fragments/chemistry RNA, Non-U.S. Gov't Support, P.H.S. Thermus thermophilus/*enzymology/genetics, Transfer, U.S. Gov't, Unité ARN

Becker H D, Min B, Jacobi C, Raczniak G, Pelaschier J, Roy H, Klein S, Kern D, Soll D

The heterotrimeric Thermus thermophilus Asp-tRNA(Asn) amidotransferase can also generate Gln-tRNA(Gln) Article de journal

Dans: FEBS Lett, vol. 476, no. 3, p. 140-144, 2000, ISBN: 10913601, (0014-5793 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Sequence Cloning, Amino Acyl/*metabolism Recombinant Proteins/chemistry/genetics/metabolism Sequence Deletion Substrate Specificity Support, Bacterial Molecular Sequence Data Nitrogenous Group Transferases/chemistry/genetics/*metabolism Protein Structure, Bacterial/metabolism RNA, Molecular Escherichia coli/genetics Genes, Non-U.S. Gov't Thermus thermophilus/*enzymology/genetics, Quaternary RNA, Transfer, Unité ARN

1999

Auxilien S., Keith G., Grice S. F. Le, Darlix J. L.

Role of post-transcriptional modifications of primer tRNALys,3 in the fidelity and efficacy of plus strand DNA transfer during HIV-1 reverse transcription Article de journal

Dans: J Biol Chem, vol. 274, no. 7, p. 4412-20, 1999, (0021-9258 Journal Article).

Résumé | BibTeX | Étiquettes: *RNA, *Transcription, Acid, Base, Calf, Conformation, Data, DNA, Genetic, Gov't, H, HIV-1, HIV-1/*physiology, Lys/*metabolism, Molecular, Non-U.S., Nucleic, post-transcriptional, Processing, Reverse, Ribonuclease, RNA, Sequence, Support, Templates, Thymus/metabolism, Transcriptase/metabolism, Transfer, Viral/*metabolism, Viral/metabolism

Perreau V. M., Keith G., Holmes W. M., Przykorska A., Santos M. A., Tuite M. F.

The Candida albicans CUG-decoding ser-tRNA has an atypical anticodon stem-loop structure Article de journal

Dans: J Mol Biol, vol. 293, no. 5, p. 1039-53, 1999, (0022-2836 Journal Article).

Résumé | BibTeX | Étiquettes: *Nucleic, Acid, albicans/*genetics, Anticodon/*chemistry/*genetics/metabolism, Base, Candida, cerevisiae/genetics, Code/genetics, Conformation, Evolution, Fungal/chemistry/genetics/metabolism, Genetic, Gov't, Imidazoles/metabolism, Lead/metabolism, Methylation, Methyltransferases/metabolism, Molecular, Mutation/genetics, Non-P.H.S., Non-U.S., Nucleosides/genetics/metabolism, P.H.S., Ribonucleases/metabolism, RNA, Saccharomyces, Sequence, Ser/*chemistry/*genetics/metabolism, Solutions, Support, Transfer, tRNA, U.S.

Wolfson A D, Khvorova A M, Sauter C, Florentz C, Giege R

Mimics of yeast tRNAAsp and their recognition by aspartyl-tRNA synthetase Article de journal

Dans: Biochemistry, vol. 38, no. 37, p. 11926-11932, 1999, ISBN: 10508395, (0006-2960 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Acylation Aspartate-tRNA Ligase/*chemistry/metabolism Base Sequence Catalysis Cloning, Asp/*chemistry/genetics/metabolism Saccharomyces cerevisiae Support, FLORENTZ, Molecular Enzyme Activation/genetics Genetic Engineering Molecular Mimicry Molecular Sequence Data Mutagenesis, Non-U.S. Gov't, Site-Directed Plasmids/chemical synthesis RNA, Transfer, Unité ARN

Sil'nikov V N, Luk'ianchuk N P, Shishkin G V, Giege R, Vlasov V V

[Imidazole compounds simulated active center of ribonuclease A. Synthesis and RNA cleaving activity] Article de journal

Dans: Dokl Akad Nauk, vol. 364, no. 5, p. 690-694, 1999, ISBN: 10347826, (0869-5652 Journal Article).

Liens | BibTeX | Étiquettes: Base Sequence Binding Sites *Imidazoles/chemical synthesis/chemistry/metabolism Molecular Sequence Data RNA, Pancreatic/*chemistry/metabolism Substrate Specificity, Phe/*metabolism Ribonuclease, Transfer, Unité ARN

Schaub M, Myslinski E, Krol A, Carbon P

Maximization of selenocysteine tRNA and U6 small nuclear RNA transcriptional activation achieved by flexible utilization of a Staf zinc finger Article de journal

Dans: J Biol Chem, vol. 274, no. 35, p. 25042-25050, 1999, ISBN: 10455183, (0021-9258 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Sequence Animals Binding Sites/genetics DNA/genetics DNA-Binding Proteins/*genetics Human Hydroxyl Radical/metabolism Microinjections Molecular Sequence Data Mutation Oocytes Peptide Fragments/immunology Promoter Regions (Genetics) Protein Binding RNA, Amino Acid-Specific/*genetics Sequence Homology Support, Genetic Trans-Activation (Genetics)/*genetics Trans-Activators/*genetics Transcription Factors/genetics Xenopus Zinc Fingers/*genetics, Non-U.S. Gov't Templates, Small Nuclear/*genetics RNA, Transfer, Unité ARN

Schaub M, Krol A, Carbon P

Flexible zinc finger requirement for binding of the transcriptional activator staf to U6 small nuclear RNA and tRNA(Sec) promoters Article de journal

Dans: J Biol Chem, vol. 274, no. 34, p. 24241-24249, 1999, ISBN: 10446199, (0021-9258 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Sequence Animals Binding Sites DNA-Binding Proteins/chemistry/*metabolism Deoxyribonuclease I/pharmacology Human Molecular Sequence Data *Promoter Regions (Genetics) RNA, Amino Acid-Specific/*genetics Support, Non-U.S. Gov't Trans-Activators/chemistry/*metabolism Xenopus *Zinc Fingers, Small Nuclear/*genetics RNA, Transfer, Unité ARN

Sankaranarayanan R, Dock-Bregeon A C, Romby P, Caillet J, Springer M, Rees B, Ehresmann C, Ehresmann B, Moras D

The structure of threonyl-tRNA synthetase-tRNA(Thr) complex enlightens its repressor activity and reveals an essential zinc ion in the active site Article de journal

Dans: Cell, vol. 97, no. 3, p. 371-381, 1999, ISBN: 10319817, (0092-8674 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Support, Amino Acyl/*chemistry/genetics/*metabolism Sequence Homology, Messenger/genetics RNA, Non-U.S. Gov't Zinc/*chemistry, ROMBY, Secondary Protein Structure, Tertiary RNA, Transfer, Unité ARN

Rudinger-Thirion J, Giege R, Felden B

Aminoacylated tmRNA from Escherichia coli interacts with prokaryotic elongation factor Tu Article de journal

Dans: RNA, vol. 5, no. 8, p. 989-992, 1999, ISBN: 10445873, (1355-8382 Letter).

Liens | BibTeX | Étiquettes: Ala/metabolism RNA, Amino Acyl/*metabolism Support, Bacterial/*metabolism RNA, Base Sequence Escherichia coli/*genetics Guanosine Triphosphate/metabolism Models, Genetic Molecular Sequence Data Nucleic Acid Conformation Peptide Elongation Factor Tu/*metabolism RNA, Non-U.S. Gov't Thermus thermophilus/*metabolism Time Factors, Transfer, Unité ARN

Rudinger-Thirion J, Giege R

The peculiar architectural framework of tRNASec is fully recognized by yeast AspRS Article de journal

Dans: RNA, vol. 5, no. 4, p. 495-502, 1999, ISBN: 10199566, (1355-8382 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid-Specific/*genetics RNA, Amino Acyl-tRNA Ligases/*genetics/metabolism Anticodon/genetics Aspartic Acid/genetics/metabolism Base Sequence Escherichia coli/genetics Fungi/*enzymology/genetics Molecular Sequence Data Mutation Nucleic Acid Conformation RNA, Asp/genetics Selenocysteine/genetics/metabolism Support, Bacterial/genetics RNA, Non-U.S. Gov't, Transfer, Unité ARN

Petyuk V A, Zenkova M A, Giege R, Vlassov V V

Hybridization of antisense oligonucleotides with the 3'part of tRNA(Phe) Article de journal

Dans: FEBS Lett, vol. 444, no. 2-3, p. 217-221, 1999, ISBN: 10050762, (0014-5793 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Antisense/*genetics RNA, Base Sequence Electrophoresis, Calf Thymus/metabolism Support, Fungal/genetics RNA, Non-U.S. Gov't, Phe/*genetics Ribonuclease H, Polyacrylamide Gel Molecular Sequence Data Nucleic Acid Conformation Nucleic Acid Hybridization/*genetics Oligodeoxyribonucleotides/genetics Oligonucleotides, Transfer, Unité ARN

Petyuk V, Zenkova M, Giege R, Vlassov V

Interaction of complementary oligonucleotides with the 3'-end of yeast tRNA(Phe) Article de journal

Dans: Nucleosides Nucleotides, vol. 18, no. 6-7, p. 1459-1461, 1999, ISBN: 10474225, (0732-8311 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Non-U.S. Gov't, Nucleic Acid Conformation RNA, Phe/*chemistry Saccharomyces cerevisiae/*genetics Support, Transfer, Unité ARN

Perreau V M, Keith G, Holmes W M, Przykorska A, Santos M A, Tuite M F

The Candida albicans CUG-decoding ser-tRNA has an atypical anticodon stem-loop structure Article de journal

Dans: J Mol Biol, vol. 293, no. 5, p. 1039-1053, 1999, ISBN: 10547284, (0022-2836 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Anticodon/*chemistry/*genetics/metabolism Base Sequence Candida albicans/*genetics Evolution, Fungal/chemistry/genetics/metabolism RNA, Molecular Genetic Code/genetics Imidazoles/metabolism Lead/metabolism Methylation Mutation/genetics *Nucleic Acid Conformation Nucleosides/genetics/metabolism RNA, Non-P.H.S. Support, Non-U.S. Gov't Support, P.H.S. tRNA Methyltransferases/metabolism, Ser/*chemistry/*genetics/metabolism Ribonucleases/metabolism Saccharomyces cerevisiae/genetics Solutions Support, Transfer, U.S. Gov't, Unité ARN

1998

Friant S., Heyman T., Bystrom A. S., Wilhelm M., Wilhelm F. X.

Interactions between Ty1 retrotransposon RNA and the T and D regions of the tRNA(iMet) primer are required for initiation of reverse transcription in vivo Article de journal

Dans: Mol Cell Biol, vol. 18, no. 2, p. 799-806, 1998, (0270-7306 Journal Article).

Résumé | BibTeX | Étiquettes: *Retroelements, *Transcription, Acid, Base, Binding, cerevisiae, Conformation, Data, DNA, Fungal/*metabolism, Fungal/biosynthesis, Genetic, Gov't, Met/*metabolism, Molecular, Mutagenesis, Non-U.S., Nucleic, Primers, Replication, RNA, Saccharomyces, Sequence, Sites, Support, Transfer

Gabus C., Ficheux D., Rau M., Keith G., Sandmeyer S., Darlix J. L.

The yeast Ty3 retrotransposon contains a 5'-3' bipartite primer-binding site and encodes nucleocapsid protein NCp9 functionally homologous to HIV-1 NCp7 Article de journal

Dans: EMBO J, vol. 17, no. 16, p. 4873-80, 1998, (0261-4189 Journal Article).

Résumé | BibTeX | Étiquettes: *Capsid, *Retroelements, Acid, Base, Binding, Capsid/*genetics, cerevisiae/*genetics, dimerization, gag/*genetics, Gene, Gov't, Homology, Met/genetics/*metabolism, Non-U.S., Nucleic, P.H.S., Products, Proteins, RNA, Saccharomyces, Sequence, Sites, Support, Transfer, U.S.

1997

Friant S., Heyman T., Poch O., Wilhelm M., Wilhelm F. X.

Sequence comparison of the Ty1 and Ty2 elements of the yeast genome supports the structural model of the tRNAiMet-Ty1 RNA reverse transcription initiation complex Article de journal

Dans: Yeast, vol. 13, no. 7, p. 639-45, 1997, (0749-503x Journal Article).

Résumé | BibTeX | Étiquettes: *Sequence, Acid, Alignment, Amino, Analysis, Base, Data, DNA, Elements/*genetics, Fungal/genetics, Gov't, Met/*chemistry/*genetics, Molecular, Non-U.S., RNA, Sequence, structure, Support, Transfer, Transposable, Yeasts/*genetics

Vlassov V, Abramova T, Godovikova T, Giege R, Silnikov V

Sequence-specific cleavage of yeast tRNA(Phe) with oligonucleotides conjugated to a diimidazole construct Article de journal

Dans: Antisense Nucleic Acid Drug Dev, vol. 7, no. 1, p. 39-42, 1997, ISBN: 9055037, (1087-2906 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Antisense/chemical synthesis/metabolism/*pharmacology RNA, Base Sequence Imidazoles/*chemistry Molecular Sequence Data Oligonucleotides, Fungal/*drug effects RNA, Non-U.S. Gov't Yeasts/genetics, Pancreatic/pharmacology Support, Phe/chemistry/*drug effects/*metabolism Ribonuclease, Transfer, Unité ARN

Vlassov A V, Andrievskaya O A, Kanyshkova T G, Baranovsky A G, Naumov V A, Breusov A A, Giege R, Buneva V N, Nevinsky G A

RNA-hydrolyzing antibodies from peripheral blood of patients with lupus erythematosus Article de journal

Dans: Biochemistry (Mosc), vol. 62, no. 5, p. 474-479, 1997, ISBN: 9275287, (0006-2979 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Antibodies, Catalytic/*blood Human Hydrolysis Lupus Erythematosus, Lys/chemistry/*metabolism, Systemic/blood/*immunology Nucleic Acid Conformation RNA, Transfer, Unité ARN

Sissler M, Eriani G, Martin F, Giege R, Florentz C

Mirror image alternative interaction patterns of the same tRNA with either class I arginyl-tRNA synthetase or class II aspartyl-tRNA synthetase Article de journal

Dans: Nucleic Acids Res, vol. 25, no. 24, p. 4899-4906, 1997, ISBN: 9396794, (0305-1048 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Anticodon/chemistry Arginine-tRNA Ligase/classification/*metabolism Aspartate-tRNA Ligase/classification/*metabolism Base Sequence DNA Footprinting Escherichia coli Fungal Proteins/classification/*metabolism Models, Arg/chemistry/*metabolism RNA, Asp/chemistry/*metabolism Recombinant Fusion Proteins/metabolism Saccharomyces cerevisiae/metabolism Stereoisomerism Substrate Specificity Support, ERIANI, FLORENTZ, Fungal/chemistry/*metabolism RNA, Molecular Molecular Sequence Data *Nucleic Acid Conformation Protein Binding RNA, Non-U.S. Gov't, SISSLER, Transfer, Unité ARN

Senger B, Auxilien S, Englisch U, Cramer F, Fasiolo F

The modified wobble base inosine in yeast tRNAIle is a positive determinant for aminoacylation by isoleucyl-tRNA synthetase Article de journal

Dans: Biochemistry, vol. 36, no. 27, p. 8269-8275, 1997, ISBN: 9204872, (0006-2960 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Acylation Anticodon Base Sequence Escherichia coli/genetics Inosine/*chemistry/metabolism Isoleucine-tRNA Ligase/*metabolism Molecular Sequence Data Nucleic Acid Conformation Pseudouridine/chemistry/metabolism RNA, Bacterial/chemistry/metabolism RNA, Fungal/chemistry/metabolism RNA, Ile/*chemistry/metabolism Saccharomyces cerevisiae/*genetics Structure-Activity Relationship Substrate Specificity Support, Non-U.S. Gov't, Transfer, Unité ARN

Rudinger J, Felden B, Florentz C, Giege R

Strategy for RNA recognition by yeast histidyl-tRNA synthetase Article de journal

Dans: Bioorg Med Chem, vol. 5, no. 6, p. 1001-1009, 1997, ISBN: 9222493, (0968-0896 Journal Article Review Review, Tutorial).

Résumé | Liens | BibTeX | Étiquettes: Amino Acyl/metabolism RNA, Base Sequence Histidine-tRNA Ligase/*metabolism Molecular Sequence Data RNA, FLORENTZ, Fungal/*metabolism RNA, Non-U.S. Gov't, Transfer, Unité ARN, Viral/metabolism Saccharomyces cerevisiae/*enzymology Substrate Specificity Support