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192 Entrées « 4 de 4 »

2005

Gultyaev A P, Pleij C W A, Westhof E

RNA structure: pseudoknots Chapitre d'ouvrage

Dans: Encyclopedia of Life Sciences, John Wiley & Sons, 2005.

Résumé | Liens | BibTeX | Étiquettes: RNA folding RNA secondary structure RNA tertiary structure ribozyme ribosome reprogramming frameshifting, Unité ARN, WESTHOF

2004

Westhof E

NINETY YEARS and a lot more to come Article de journal

Dans: Biochimie, vol. 86, no. 12, p. 865, 2004, ISBN: 15667935, (0300-9084 Editorial).

Liens | BibTeX | Étiquettes: Unité ARN, WESTHOF

Westhof E

How to silence silencing Article de journal

Dans: Chem Biol, vol. 11, no. 2, p. 158-160, 2004, ISBN: 15123277, (1074-5521 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Unité ARN, WESTHOF

Keiper S, Bebenroth D, Seelig B, Westhof E, Jaschke A

Architecture of a Diels-Alderase ribozyme with a preformed catalytic pocket Article de journal

Dans: Chem Biol, vol. 11, no. 9, p. 1217-1227, 2004, ISBN: 15380182, (1074-5521 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Unité ARN, WESTHOF

Francois B, Szychowski J, Adhikari S S, Pachamuthu K, Swayze E E, Griffey R H, Migawa M T, Westhof E, Hanessian S

Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site Article de journal

Dans: Angew Chem Int Ed Engl, vol. 43, no. 48, p. 6735-6738, 2004, ISBN: 15593140, (0570-0833 Journal Article).

Liens | BibTeX | Étiquettes: Unité ARN, WESTHOF

Auffinger P, Hays F A, Westhof E, Ho P S

Halogen bonds in biological molecules Article de journal

Dans: Proc Natl Acad Sci U S A, vol. 101, no. 48, p. 16789-16794, 2004, ISBN: 15557000, (0027-8424 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Unité ARN, WESTHOF

Auffinger P, Bielecki L, Westhof E

Anion binding to nucleic acids Article de journal

Dans: Structure, vol. 12, no. 3, p. 379-388, 2004, ISBN: 15016354, (0969-2126 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Anions/chemistry/*metabolism Computer Simulation Databases, Molecular Nucleic Acids/chemistry/*metabolism Support, Non-U.S. Gov't X-Ray Diffraction, Nucleic Acid Models, Unité ARN, WESTHOF

Rangan P, Masquida B, Westhof E, Woodson S A

Architecture and folding mechanism of the Azoarcus Group I Pre-tRNA Article de journal

Dans: J Mol Biol, vol. 339, no. 1, p. 41-51, 2004, ISBN: 15123419, (0022-2836 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Azoarcus/enzymology/*genetics Base Sequence Binding Sites Exoribonucleases/metabolism Hydroxyl Radical/metabolism Introns/*genetics Magnesium/chemistry Models, Bacterial/*chemistry/genetics/*metabolism RNA, Ile/chemistry/*genetics Substrate Specificity Support, Molecular Molecular Sequence Data *Nucleic Acid Conformation RNA Precursors/*genetics RNA Splice Sites/genetics RNA Splicing RNA, Non-U.S. Gov't Support, P.H.S., Transfer, U.S. Gov't, Unité ARN, WESTHOF

Malnou C E, Werner A, Borman A M, Westhof E, Kean K M

Effects of vaccine strain mutations in domain V of the internal ribosome entry segment compared in the wild type poliovirus type 1 context Article de journal

Dans: J Biol Chem, vol. 279, no. 11, p. 10261-10269, 2004, ISBN: 14672927, (0021-9258 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Sequence Blotting, Genetic, Messenger/metabolism Ribosomes/*genetics Support, Non-U.S. Gov't Translation, Tertiary RNA/chemistry RNA, Unité ARN, Viral Electrophoresis, Western DNA, WESTHOF

Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, Lafontaine I, Montigny J De, Marck C, Neuveglise C, Talla E, Goffard N, Frangeul L, Aigle M, Anthouard V, Babour A, Barbe V, Barnay S, Blanchin S, Beckerich J M, Beyne E, Bleykasten C, Boisrame A, Boyer J, Cattolico L, Confanioleri F, Daruvar A De, Despons L, Fabre E, Fairhead C, Ferry-Dumazet H, Groppi A, Hantraye F, Hennequin C, Jauniaux N, Joyet P, Kachouri R, Kerrest A, Koszul R, Lemaire M, Lesur I, Ma L, Muller H, Nicaud J M, Nikolski M, Oztas S, Ozier-Kalogeropoulos O, Pellenz S, Potier S, Richard G F, Straub M L, Suleau A, Swennen D, Tekaia F, Wesolowski-Louvel M, Westhof E, Wirth B, Zeniou-Meyer M, Zivanovic I, Bolotin-Fukuhara M, Thierry A, Bouchier C, Caudron B, Scarpelli C, Gaillardin C, Weissenbach J, Wincker P, Souciet J L

Genome evolution in yeasts Article de journal

Dans: Nature, vol. 430, no. 6995, p. 35-44, 2004, ISBN: 15229592, (1476-4687 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Chromosomes, Fungal Molecular Sequence Data RNA, Fungal/*genetics *Genome, Fungal/genetics Conserved Sequence/genetics *Evolution, Molecular Gene Duplication Genes, Non-U.S. Gov't Synteny/genetics Tandem Repeat Sequences/genetics Yeasts/*classification/*genetics, Ribosomal/genetics RNA, Transfer/genetics Saccharomyces cerevisiae Proteins/genetics Support, Unité ARN, WESTHOF

Serra M J, Smolter P E, Westhof E

Pronounced instability of tandem IU base pairs in RNA Article de journal

Dans: Nucleic Acids Res, vol. 32, no. 5, p. 1824-1828, 2004, ISBN: 15037659, (1362-4962 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Pairing Inosine/*chemistry Magnesium/chemistry Nucleic Acid Conformation RNA/*chemistry RNA Stability Support, Non-P.H.S. Thermodynamics Uracil/*chemistry, U.S. Gov't, Unité ARN, WESTHOF

Zhang H, Kolb F A, Jaskiewicz L, Westhof E, Filipowicz W

Single processing center models for human Dicer and bacterial RNase III Article de journal

Dans: Cell, vol. 118, no. 1, p. 57-68, 2004, ISBN: 15242644, (0092-8674 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Support, Amino Acid Sequence Base Sequence Comparative Study Conserved Sequence Dimerization Endoribonucleases/*chemistry/genetics/isolation & purification/*metabolism Escherichia coli/enzymology Human Manganese/metabolism MicroRNAs/metabolism Models, Double-Stranded/chemistry/*metabolism RNA, Molecular Molecular Sequence Data Molecular Weight Mutagenesis, Non-U.S. Gov't, Post-Transcriptional RNA, Secondary Protein Structure, Site-Directed Mutation Protein Structure, Small Interfering/metabolism Recombinant Proteins/metabolism Ribonuclease III/*chemistry/genetics/isolation & purification/*metabolism Sequence Homology, Tertiary RNA Helicases/*chemistry/genetics/isolation & purification/*metabolism *RNA Processing, Unité ARN, WESTHOF

Westhof E, Massire C

Structural biology. Evolution of RNA architecture Article de journal

Dans: Science, vol. 306, no. 5693, p. 62-63, 2004, ISBN: 15459373, (1095-9203 Comment Journal Article).

Liens | BibTeX | Étiquettes: Adenine/chemistry Base Pairing Computational Biology Crystallography, Bacterial/*chemistry/metabolism RNA, Molecular Nucleic Acid Conformation RNA Precursors/metabolism RNA, Transfer/metabolism Ribonuclease P/*chemistry/metabolism Thermus thermophilus/*chemistry/enzymology, Unité ARN, WESTHOF, X-Ray Evolution

Auffinger P, Bielecki L, Westhof E

Symmetric K+ and Mg2+ ion-binding sites in the 5S rRNA loop E inferred from molecular dynamics simulations Article de journal

Dans: J Mol Biol, vol. 335, no. 2, p. 555-571, 2004, ISBN: 14672663, (0022-2836 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: 5S/*chemistry/*metabolism Ribosomal Proteins/*chemistry/metabolism Support, Bacterial/chemistry RNA, Binding Sites Computer Simulation Guanine/chemistry/metabolism Hydrogen Bonding Magnesium/chemistry/*metabolism Models, Molecular Molecular Conformation Nucleic Acid Conformation Potassium/chemistry/*metabolism Protein Binding/genetics RNA, Non-U.S. Gov't Water/chemistry/metabolism, Ribosomal, Unité ARN, WESTHOF, WESTHOF Binding Sites Computer Simulation Guanine/chemistry/metabolism Hydrogen Bonding Magnesium/chemistry/*metabolism Models

2003

Leontis N B, Westhof E

Analysis of RNA motifs Article de journal

Dans: Curr Opin Struct Biol, vol. 13, no. 3, p. 300-308, 2003, ISBN: 12831880, (0959-440x Journal Article Review Review, Tutorial).

Résumé | Liens | BibTeX | Étiquettes: *Base Pairing Binding Sites Magnetic Resonance Imaging *Nucleic Acid Conformation RNA/*chemistry RNA, Chloroplast/chemistry Support, P.H.S., U.S. Gov't, Unité ARN, WESTHOF

Rangan P, Masquida B, Westhof E, Woodson S A

Assembly of core helices and rapid tertiary folding of a small bacterial group I ribozyme Article de journal

Dans: Proc Natl Acad Sci U S A, vol. 100, no. 4, p. 1574-1579, 2003, ISBN: 12574513, (0027-8424 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Azoarcus/*enzymology Base Sequence Introns Magnesium/chemistry Models, Catalytic/*chemistry/genetics Support, Molecular Molecular Sequence Data Nucleic Acid Conformation *Protein Folding Protein Structure, Non-U.S. Gov't Support, P.H.S., Tertiary RNA, U.S. Gov't, Unité ARN, WESTHOF

Vicens Q, Westhof E

Crystal structure of geneticin bound to a bacterial 16S ribosomal RNA A site oligonucleotide Article de journal

Dans: J Mol Biol, vol. 326, no. 4, p. 1175-1188, 2003, ISBN: 12589761, (0022-2836 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: 16S/*chemistry/genetics/metabolism Support, Anti-Bacterial Agents/*chemistry/metabolism Binding Sites Crystallography, Bacterial Gentamicins/*chemistry/metabolism Human Models, Molecular Molecular Structure *Nucleic Acid Conformation Oligonucleotides/*chemistry/genetics/metabolism Protein Binding *Protein Conformation RNA, Non-U.S. Gov't, Ribosomal, Unité ARN, WESTHOF, X-Ray Drug Design Genes

Tsai H Y, Masquida B, Biswas R, Westhof E, Gopalan V

Molecular modeling of the three-dimensional structure of the bacterial RNase P holoenzyme Article de journal

Dans: J Mol Biol, vol. 325, no. 4, p. 661-675, 2003, ISBN: 12507471, (0022-2836 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Sequence Base Sequence Catalytic Domain Computer Simulation Cysteine/chemistry DNA Footprinting DNA, Bacterial/chemistry/genetics/metabolism RNA, Bacterial/genetics Edetic Acid Endoribonucleases/*chemistry/genetics/metabolism Escherichia coli/*enzymology/genetics Evolution, Catalytic/*chemistry/genetics/metabolism Ribonuclease P Support, Molecular Ferrous Compounds Holoenzymes/chemistry/genetics/metabolism Hydroxyl Radical/chemistry Models, Molecular Molecular Sequence Data Mutagenesis, Non-P.H.S. Support, P.H.S., Site-Directed Nucleic Acid Conformation Protein Subunits RNA, U.S. Gov't, Unité ARN, WESTHOF

Vicens Q, Westhof E

Molecular recognition of aminoglycoside antibiotics by ribosomal RNA and resistance enzymes: an analysis of x-ray crystal structures Article de journal

Dans: Biopolymers, vol. 70, no. 1, p. 42-57, 2003, ISBN: 12925992, (0006-3525 Journal Article Review Review, Tutorial).

Résumé | Liens | BibTeX | Étiquettes: Aminoglycosides/*chemistry Anti-Bacterial Agents/*chemistry Binding Sites Crystallography, Chemical Models, Microbial Enzymes/*chemistry Models, Molecular Protein Binding RNA/chemistry RNA, Ribosomal/*chemistry Ribosomes/chemistry, Unité ARN, WESTHOF, X-Ray/*methods *Drug Resistance

Vicens Q, Westhof E

RNA as a drug target: the case of aminoglycosides Article de journal

Dans: Chembiochem, vol. 4, no. 10, p. 1018-1023, 2003, ISBN: 14523919, (1439-4227 Journal Article Review Review, Tutorial).

Liens | BibTeX | Étiquettes: 16S/*chemistry/drug effects/metabolism Substrate Specificity Technology, Aminoglycosides/*pharmacology Anti-Bacterial Agents/*pharmacology Binding Sites Drug Delivery Systems Models, Catalytic/chemistry/metabolism RNA, Molecular RNA/chemistry/metabolism RNA, Pharmaceutical Water/chemistry, Ribosomal, Unité ARN, WESTHOF

Khvorova A, Lescoute A, Westhof E, Jayasena S D

Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity Article de journal

Dans: Nat Struct Biol, vol. 10, no. 9, p. 708-712, 2003, ISBN: 12881719, (1072-8368 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acid Motifs Base Sequence Catalysis Dose-Response Relationship, Catalytic/*chemistry Sequence Homology, Drug Genes, Nucleic Acid Time Factors, Reporter Genetic Vectors Kinetics Magnesium/chemistry Molecular Sequence Data Mutation Nucleic Acid Conformation Plasmids/metabolism Protein Binding Protein Conformation RNA/metabolism RNA, Unité ARN, WESTHOF

Auffinger P, Bielecki L, Westhof E

The Mg2+ binding sites of the 5S rRNA loop E motif as investigated by molecular dynamics simulations Article de journal

Dans: Chem Biol, vol. 10, no. 6, p. 551-561, 2003, ISBN: 12837388, (1074-5521 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: 5S/*chemistry/metabolism Support, Bacterial/*chemistry RNA, Binding Sites Cations, Divalent Computer Simulation Crystallization Electrostatics Hydrogen Bonding Magnesium/*chemistry/metabolism Models, Molecular Molecular Conformation Nucleic Acid Conformation RNA Stability RNA, Non-U.S. Gov't Thermodynamics Water/chemistry, Ribosomal, Unité ARN, WESTHOF

Caillet J, Nogueira T, Masquida B, Winter F, Graffe M, Dock-Bregeon A C, Torres-Larios A, Sankaranarayanan R, Westhof E, Ehresmann B, Ehresmann C, Romby P, Springer M

The modular structure of Escherichia coli threonyl-tRNA synthetase as both an enzyme and a regulator of gene expression Article de journal

Dans: Mol Microbiol, vol. 47, no. 4, p. 961-974, 2003, ISBN: 12581352, (0950-382x Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Amino Acyl/chemistry/metabolism Ribosomes/metabolism Support, Bacterial Genes, Bacterial Macromolecular Systems Models, Bacterial/chemistry/metabolism RNA, Binding Sites Binding, Competitive Escherichia coli/*enzymology/*genetics Evolution, Messenger/metabolism RNA, Molecular Gene Expression Regulation, Molecular Molecular Mimicry Molecular Structure Mutation Operator Regions (Genetics) Protein Structure, Non-U.S. Gov't Threonine-tRNA Ligase/*chemistry/genetics/*metabolism, ROMBY, Tertiary Protein Subunits RNA, Transfer, Unité ARN, WESTHOF

Yang H, Jossinet F, Leontis N, Chen L, Westbrook J, Berman H, Westhof E

Tools for the automatic identification and classification of RNA base pairs Article de journal

Dans: Nucleic Acids Res, vol. 31, no. 13, p. 3450-3460, 2003, ISBN: 12824344, (1362-4962 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Algorithms Base Pairing Base Sequence Computer Graphics Data Interpretation, Molecular Nucleic Acid Conformation RNA/*chemistry/classification *Software Support, Non-P.H.S. Support, Non-U.S. Gov't Support, Nucleic Acid Internet Models, P.H.S., Statistical Databases, U.S. Gov't, Unité ARN, WESTHOF

Pfister P, Hobbie S, Vicens Q, Bottger E C, Westhof E

The molecular basis for A-site mutations conferring aminoglycoside resistance: relationship between ribosomal susceptibility and X-ray crystal structures Article de journal

Dans: Chembiochem, vol. 4, no. 10, p. 1078-1088, 2003, ISBN: 14523926, (1439-4227 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Aminoglycosides/*pharmacology Anti-Bacterial Agents/*pharmacology Binding Sites Comparative Study Crystallography, Bacterial/genetics Ribosomes/*chemistry/drug effects/metabolism Species Specificity Structure-Activity Relationship Support, Molecular Mutagenesis, Non-U.S. Gov't, Site-Directed Nucleic Acid Conformation Oligonucleotides/chemistry/metabolism Plasmids Point Mutation/drug effects RNA, Unité ARN, WESTHOF, X-Ray Drug Design Drug Resistance Escherichia coli/genetics/metabolism Hemagglutinins Models

2002

Walter F, Putz J, Giege R, Westhof E

Binding of tobramycin leads to conformational changes in yeast tRNA(Asp) and inhibition of aminoacylation Article de journal

Dans: EMBO J, vol. 21, no. 4, p. 760-768, 2002, ISBN: 11847123, (0261-4189 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Acylation Base Sequence Carbohydrate Sequence Fluorescence Polarization Molecular Sequence Data *Nucleic Acid Conformation RNA, Asp/chemistry/*metabolism Saccharomyces cerevisiae/*genetics Support, Fungal/chemistry/*metabolism RNA, Non-U.S. Gov't Tobramycin/*metabolism, Transfer, Unité ARN, WESTHOF

van Buuren B N, Hermann T, Wijmenga S S, Westhof E

Brownian-dynamics simulations of metal-ion binding to four-way junctions Article de journal

Dans: Nucleic Acids Res, vol. 30, no. 2, p. 507-514, 2002, ISBN: 11788713, (1362-4962 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Pair Mismatch Base Sequence Binding Sites Cations/*metabolism *Computer Simulation DNA/*chemistry/genetics/*metabolism Diffusion Electrostatics Metals/*metabolism Models, Biomolecular *Nucleic Acid Conformation Nucleic Acid Hybridization RNA/chemistry/genetics/metabolism Recombination, Genetic/*genetics Support, Molecular Nuclear Magnetic Resonance, Non-U.S. Gov't, Unité ARN, WESTHOF

Vicens Q, Westhof E

Crystal structure of a complex between the aminoglycoside tobramycin and an oligonucleotide containing the ribosomal decoding a site Article de journal

Dans: Chem Biol, vol. 9, no. 6, p. 747-755, 2002, ISBN: 12079787, (1074-5521 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: 16S/*chemistry Support, Anti-Bacterial Agents/*chemistry Binding Sites Crystallography Escherichia coli/metabolism Models, Molecular Oligonucleotides/*chemistry Paromomycin/chemistry Protein Structure, Non-U.S. Gov't Tobramycin/*chemistry, Ribosomal, Secondary Protein Structure, Tertiary RNA, Unité ARN, WESTHOF

Serra M J, Baird J D, Dale T, Fey B L, Retatagos K, Westhof E

Effects of magnesium ions on the stabilization of RNA oligomers of defined structures Article de journal

Dans: RNA, vol. 8, no. 3, p. 307-323, 2002, ISBN: 12003491, (1355-8382 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Pairing Heat Hydrogen Bonding Magnesium/*pharmacology Models, Molecular Nucleic Acid Conformation RNA/*metabolism RNA Stability/*drug effects Support, Non-P.H.S. Support, Non-U.S. Gov't Support, P.H.S. Thermodynamics, U.S. Gov't, Unité ARN, WESTHOF

Westhof E

Foreword Article de journal

Dans: Biochimie, vol. 84, no. 8, p. 687-689, 2002.

Liens | BibTeX | Étiquettes: Unité ARN, WESTHOF

Westhof E

Group I introns and RNA folding Article de journal

Dans: Biochem Soc Trans, vol. 30, no. Pt 6, p. 1149-1152, 2002, ISBN: 12440993, (0300-5127 Journal Article Review Review, Tutorial).

Résumé | Liens | BibTeX | Étiquettes: Base Sequence *Introns Molecular Sequence Data *Nucleic Acid Conformation RNA/*chemistry RNA Splicing RNA, Catalytic, Unité ARN, WESTHOF

Auffinger P, Westhof E

Melting of the solvent structure around a RNA duplex: a molecular dynamics simulation study Article de journal

Dans: Biophys Chem, vol. 95, no. 3, p. 203-210, 2002, ISBN: 12062380, (0301-4622 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Computer Simulation Entropy Models, Double-Stranded/*chemistry Solvents/chemistry/metabolism Temperature Thermodynamics Water/*chemistry/metabolism, Molecular Molecular Structure Motion Nucleic Acid Conformation RNA, Unité ARN, WESTHOF

Waldsich C, Masquida B, Westhof E, Schroeder R

Monitoring intermediate folding states of the td group I intron in vivo Article de journal

Dans: EMBO J, vol. 21, no. 19, p. 5281-5291, 2002, ISBN: 12356744, (0261-4189 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Bacterial/chemistry/genetics Escherichia coli/genetics Introns/*physiology Models, Base Sequence DNA, Molecular Molecular Sequence Data *Nucleic Acid Conformation Support, Non-U.S. Gov't, Unité ARN, WESTHOF

Leontis N B, Stombaugh J, Westhof E

Motif prediction in ribosomal RNAs Lessons and prospects for automated motif prediction in homologous RNA molecules Article de journal

Dans: Biochimie, vol. 84, no. 9, p. 961-973, 2002, ISBN: 12458088, (0300-9084 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Bacterial/*chemistry/genetics RNA, Base Pairing Base Sequence Catalytic Domain Conserved Sequence Databases, Factual Models, Molecular *Nucleic Acid Conformation RNA, Non-P.H.S. Support, P.H.S., Ribosomal/*chemistry/genetics Sequence Alignment Support, U.S. Gov't, Unité ARN, WESTHOF

Fedor M J, Westhof E

Ribozymes: the first 20 years Article de journal

Dans: Mol Cell, vol. 10, no. 4, p. 703-704, 2002, ISBN: 12419214, (1097-2765 Congresses).

Résumé | Liens | BibTeX | Étiquettes: Catalysis Introns/genetics RNA Precursors/genetics/metabolism RNA Splicing RNA, Catalytic/chemistry/genetics/*metabolism, Unité ARN, WESTHOF

Waugh A, Gendron P, Altman R, Brown J W, Case D, Gautheret D, Harvey S C, Leontis N, Westbrook J, Westhof E, Zuker M, Major F

RNAML: a standard syntax for exchanging RNA information Article de journal

Dans: RNA, vol. 8, no. 6, p. 707-717, 2002, ISBN: 12088144, (1355-8382 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: *Databases, Non-P.H.S. Support, Non-U.S. Gov't Support, Nucleic Acid *Nucleic Acid Conformation Programming Languages RNA/*chemistry Support, P.H.S., U.S. Gov't, Unité ARN, WESTHOF

Auffinger P, Masquida B, Westhof E

Strucutral and dynamical characterization of nucleic acids water and ion binding sites. Chapitre d'ouvrage

Dans: Schlick, T; Gan, H H (Ed.): Computational methods for macromolecules: challenges and applications. Proceedings of the 3rd international workshop on algorithms for macromolecular modeling, New York, October 12-14, 2000. Lecture Notes in Computational Science and Engineering., vol. 24, p. 61-70, Springer, 2002.

Résumé | Liens | BibTeX | Étiquettes: Unité ARN, WESTHOF

Leontis N, Westhof E

The annotation of RNA motifs Article de journal

Dans: Comp Funct Genom, vol. 3, no. 6, p. 518-524, 2002.

Résumé | Liens | BibTeX | Étiquettes: Unité ARN, WESTHOF, WESTHOF RNA motif Annotation Non-Watson–Crick basepair Shallow-groove Sugar-edge Watson–Crick edge Hoogsteen edge Isostericity matrix

Leontis N B, Stombaugh J, Westhof E

The non-Watson-Crick base pairs and their associated isostericity matrices Article de journal

Dans: Nucleic Acids Res, vol. 30, no. 16, p. 3497-3531, 2002, ISBN: 12177293, (1362-4962 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Algorithms *Base Pairing Base Sequence Hydrogen Bonding Models, Molecular RNA/*chemistry/classification/genetics Sequence Homology Support, Non-P.H.S. Support, P.H.S. Terminology, U.S. Gov't, Unité ARN, WESTHOF

1992

Westhof E

Westhof's rule Article de journal

Dans: Nature, vol. 358, no. 6386, p. 459-460, 1992, ISBN: 1641036, (0028-0836 Letter).

Liens | BibTeX | Étiquettes: *Hydrogen Bonding *Nucleic Acid Conformation, Unité ARN, WESTHOF

Pauly M, Treger M, Westhof E, Chambon P

The initiation accuracy of the SV40 early transcription is determined by the functional domains of two TATA elements Article de journal

Dans: Nucleic Acids Res, vol. 20, no. 5, p. 975-982, 1992, ISBN: 1312710, (0305-1048 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Sequence DNA Mutational Analysis DNA, Genetic/*genetics, Non-U.S. Gov't TATA Box/*genetics Transcription, Unité ARN, Viral/*genetics Hela Cells Human Molecular Sequence Data Nucleic Acid Conformation Simian virus 40/*genetics Support, Viral/chemistry/genetics Electrophoresis Genes, WESTHOF

Rippe K, Fritsch V, Westhof E, Jovin T M

Alternating d(G-A) sequences form a parallel-stranded DNA homoduplex Article de journal

Dans: EMBO J, vol. 11, no. 10, p. 3777-3786, 1992, ISBN: 1396571, (0261-4189 Journal Article).

Résumé | Liens | BibTeX | Étiquettes: Base Sequence Circular Dichroism DNA/*chemistry Hydrogen Bonding Hydrogen-Ion Concentration Indicators and Reagents Magnesium Chloride Models, Fluorescence Spectrophotometry, MARQUET, Molecular Molecular Sequence Data *Nucleic Acid Conformation Oligodeoxyribonucleotides/*chemistry Spectrometry, PAILLART, Ultraviolet Structure-Activity Relationship Thermodynamics, Unité ARN, WESTHOF

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