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Hammann P, Parmentier D, Cerciat M, Reimegård J, Helfer A-C, Boisset S, Guillier M, Vandenesch F, Wagner G E H, Romby P, Fechter P

A method to map changes in bacterial surface composition induced by regulatory RNAs in Escherichia coli and Staphylococcus aureus. Journal Article

In: Biochimie, vol. 106, pp. 175–179, 2014, ISSN: 1638-6183 0300-9084, (Place: France).

Abstract | Links | BibTeX | Tags: Bacterial Outer Membrane Proteins/metabolism, Bacterial Proteins/*metabolism, Bacterial/genetics/*metabolism, Base Sequence, Carbocyanines/metabolism, Cell Membrane/*metabolism, Cell Wall/metabolism, Confocal, DIGE, Electrophoresis, Escherichia coli/genetics/*metabolism, Gel, Mass, Matrix-Assisted Laser Desorption-Ionization, Microscopy, Molecular Sequence Data, Non-coding RNAs, Post-transcriptional regulation, PPSE, Reproducibility of Results, RNA, Spectrometry, Staining and Labeling/methods, Staphylococcus aureus/genetics/*metabolism, Surface proteins, Two-Dimensional/methods


Hamrita Bechr, Chahed Karim, Trimeche Mounir, Guillier Christelle Lemaitre, Hammann Philippe, Chaïeb Anouar, Korbi Sadok, Chouchane Lotfi

Proteomics-based identification of alpha1-antitrypsin and haptoglobin precursors as novel serum markers in infiltrating ductal breast carcinomas. Journal Article

In: Clinica chimica acta; international journal of clinical chemistry, vol. 404, no. 2, pp. 111–118, 2009, ISSN: 1873-3492 0009-8981, (Place: Netherlands).

Abstract | Links | BibTeX | Tags: 80 and over, Adult, Aged, alpha 1-Antitrypsin/*blood, Amino Acid Sequence, Biomarkers, Breast Neoplasms/blood/*pathology, Carcinoma, Ductal/blood/*pathology, Electrophoresis, Female, Gel, Haptoglobins/*analysis, Humans, Mass, Matrix-Assisted Laser Desorption-Ionization, Middle Aged, Molecular Sequence Data, PPSE, Protein Isoforms/blood, proteomics, Spectrometry, Tumor/*blood, Two-Dimensional


Bringel Françoise, Hammann Philippe, Kugler Valérie, Arsène-Ploetze Florence

Lactobacillus plantarum response to inorganic carbon concentrations: PyrR2-dependent and -independent transcription regulation of genes involved in arginine and nucleotide metabolism. Journal Article

In: Microbiology (Reading, England), vol. 154, no. Pt 9, pp. 2629–2640, 2008, ISSN: 1350-0872 1350-0872, (Place: England).

Abstract | Links | BibTeX | Tags: Arginine/*biosynthesis, Argininosuccinate Lyase/genetics, Bacterial, Bacterial Proteins/*genetics, Bacterial/genetics, Carbon Compounds, Carbon Dioxide/metabolism, Electrophoresis, Gel, Gene Expression Regulation, Genetic, IMP Dehydrogenase/genetics, Inorganic/*metabolism, Lactobacillus plantarum/enzymology/genetics/*metabolism, Mass, Matrix-Assisted Laser Desorption-Ionization, Nucleotides/*biosynthesis, Pentosyltransferases/*genetics, PPSE, proteomics, Repressor Proteins/*genetics, Reverse Transcriptase Polymerase Chain Reaction, RNA, Spectrometry, Transcription, Two-Dimensional


Przykorska A., Solecka K., Olszak K., Keith G., Nawrot B., Kuligowska E.

Wheat (Triticum vulgare) chloroplast nuclease ChSI exhibits 5' flap structure-specific endonuclease activity Journal Article

In: Biochemistry, vol. 43, no. 35, pp. 11283-94, 2004, (0006-2960 Journal Article).

Abstract | BibTeX | Tags: &, Acid, Catalysis, Chloroplasts/*enzymology, Conformation, Desorption-Ionization, DNA, Endonucleases/*chemistry/isolation, Exonucleases/chemistry/metabolism, Flap, Gov't, Hydrolysis, KEITH, Kinetics, Laser, Mass, Matrix-Assisted, Non-U.S., Nucleic, Oligonucleotides/chemical, Plant/chemistry/metabolism, purification/*metabolism, Relationship, Single-Stranded/chemistry/metabolism, Specificity, Spectrometry, Structure-Activity, Substrate, Support, synthesis/metabolism, Thermodynamics, Triticum/*enzymology

Przykorska A, Solecka K, Olszak K, Keith G, Nawrot B, Kuligowska E

Wheat (Triticum vulgare) chloroplast nuclease ChSI exhibits 5' flap structure-specific endonuclease activity Journal Article

In: Biochemistry, vol. 43, no. 35, pp. 11283-11294, 2004, ISBN: 15366938, (0006-2960 Journal Article).

Abstract | Links | BibTeX | Tags: KEITH Catalysis Chloroplasts/*enzymology DNA, Mass, Matrix-Assisted Laser Desorption-Ionization Structure-Activity Relationship Substrate Specificity Support, Non-U.S. Gov't Thermodynamics Triticum/*enzymology, Plant/chemistry/metabolism DNA, Single-Stranded/chemistry/metabolism Exonucleases/chemistry/metabolism Flap Endonucleases/*chemistry/isolation & purification/*metabolism Hydrolysis Kinetics Nucleic Acid Conformation Oligonucleotides/chemical synthesis/metabolism Spectrometry, Unité ARN


Thouzeau Cécile, Maho Yvon Le, Froget Guillaume, Sabatier Laurence, Bohec Céline Le, Hoffmann Jules A, Bulet Philippe

Spheniscins, avian beta-defensins in preserved stomach contents of the king penguin, Aptenodytes patagonicus Journal Article

In: J. Biol. Chem., vol. 278, no. 51, pp. 51053–51058, 2003, ISSN: 0021-9258.

Abstract | Links | BibTeX | Tags: Animals, Antimicrobial Cationic Peptides, bacteria, beta-Defensins, Birds, Feeding Behavior, Fungi, Gastrointestinal Contents, hoffmann, M3i, Male, Mass, Matrix-Assisted Laser Desorption-Ionization, Protein Isoforms, Sequence Alignment, Spectrometry

Sabatier Laurence, Jouanguy Emmanuelle, Dostert Catherine, Zachary Daniel, Dimarcq Jean-Luc, Bulet Philippe, Imler Jean-Luc

Pherokine-2 and -3 Journal Article

In: European journal of biochemistry / FEBS, vol. 270, no. 16, pp. 3398–3407, 2003, ISSN: 0014-2956.

Abstract | BibTeX | Tags: Animals, Antibody Formation, Base Sequence, Hemolymph, imler, M3i, Mass, Matrix-Assisted Laser Desorption-Ionization, Spectrometry


Pantarotto Davide, Bianco Alberto, Pellarini Federica, Tossi Alessandro, Giangaspero Anna, Zelezetsky Igor, Briand Jean-Paul, Prato Maurizio

Solid-phase synthesis of fullerene-peptides Journal Article

In: Journal of the American Chemical Society, vol. 124, no. 42, pp. 12543–12549, 2002, ISSN: 0002-7863.

Abstract | Links | BibTeX | Tags: Amino Acids, Anti-Bacterial Agents, Anti-Infective Agents, Candida albicans, Electrospray Ionization, Enkephalin, Escherichia coli, Fluorenes, Fullerenes, I2CT, Leucine, Mass, Microbial Sensitivity Tests, Oligopeptides, Spectrometry, Staphylococcus aureus, Team-Bianco

Ligoxygakis Petros, Bulet Philippe, Reichhart Jean-Marc

Critical evaluation of the role of the Toll-like receptor 18-Wheeler in the host defense of Drosophila Journal Article

In: EMBO Rep., vol. 3, no. 7, pp. 666–673, 2002, ISSN: 1469-221X.

Abstract | Links | BibTeX | Tags: Animals, Anti-Bacterial Agents, Antimicrobial Cationic Peptides, Cell Adhesion Molecules, Fat Body, Gene Expression Regulation, Genes, Immunohistochemistry, Immunologic, Insect, Insect Proteins, Larva, M3i, Mass, Matrix-Assisted Laser Desorption-Ionization, Membrane Proteins, Receptors, reichhart, Reporter, Spectrometry, Transgenes


Vicens Q, Westhof E

Crystal structure of paromomycin docked into the eubacterial ribosomal decoding A site Journal Article

In: Structure, vol. 9, no. 8, pp. 647-658, 2001, ISBN: 11587639, (0969-2126 Journal Article).

Abstract | Links | BibTeX | Tags: 16S/*chemistry Ribosomes/*chemistry Spectrometry, Amino Acid Motifs Anti-Bacterial Agents/chemistry Base Sequence Binding Sites Crystallography, Mass, Matrix-Assisted Laser Desorption-Ionization Support, Molecular Molecular Sequence Data Mutation Paromomycin/*chemistry Protein Structure, Non-U.S. Gov't Tobramycin/chemistry Water/chemistry, Ribosomal, Secondary RNA, Unité ARN, X-Ray Escherichia coli/metabolism Magnetic Resonance Spectroscopy Models


Uttenweiler-Joseph S, Moniatte M, Lagueux Marie, Dorsselaer Van A, Hoffmann Jules A, Bulet Philippe

Differential display of peptides induced during the immune response of Drosophila: a matrix-assisted laser desorption ionization time-of-flight mass spectrometry study Journal Article

In: Proc. Natl. Acad. Sci. U.S.A., vol. 95, no. 19, pp. 11342–11347, 1998, ISSN: 0027-8424.

Abstract | BibTeX | Tags: Animals, bacteria, Chromatography, Cloning, Hemolymph, High Pressure Liquid, hoffmann, Immunity, Insect Proteins, M3i, Mass, Matrix-Assisted Laser Desorption-Ionization, messenger, Molecular, Peptides, Protein Precursors, RNA, Sequence Analysis, Spectrometry, Time Factors

Bulet Philippe, Uttenweiler-Joseph S, Moniatte M, Dorsselaer Van A, Hoffmann Jules A

Differential display of peptides induced during the immune response of Drosophila: a matrix-assisted laser desorption ionization time-of-flight mass spectrometry study Journal Article

In: J. Protein Chem., vol. 17, no. 6, pp. 528–529, 1998, ISSN: 0277-8033.

BibTeX | Tags: Animals, Anti-Infective Agents, hoffmann, M3i, Mass, Matrix-Assisted Laser Desorption-Ionization, Peptide Biosynthesis, Peptides, Spectrometry

Taguchi S, Bulet Philippe, Hoffmann Jules A

A novel insect defensin from the ant Formica rufa Journal Article

In: Biochimie, vol. 80, no. 4, pp. 343–346, 1998, ISSN: 0300-9084.

Abstract | BibTeX | Tags: Amino Acid, Animals, Anti-Bacterial Agents, Ants, Chromatography, High Pressure Liquid, hoffmann, Insect Proteins, insects, M3i, Mass, Matrix-Assisted Laser Desorption-Ionization, Protein Structure, Secondary, Sequence Alignment, Sequence Homology, Spectrometry


de Barros J. P. Pais, Keith G., Adlouni C. El, Glasser A. L., Mack G., Dirheimer G., Desgres J.

2'-O-methyl-5-formylcytidine (f5Cm), a new modified nucleotide at the 'wobble' of two cytoplasmic tRNAs Leu (NAA) from bovine liver Journal Article

In: Nucleic Acids Res, vol. 24, no. 8, pp. 1489-96, 1996, (0305-1048 Journal Article).

Abstract | BibTeX | Tags: &, Acid, Acyl/*chemistry/isolation, Amino, Animals, Base, Borohydrides/chemistry, Cattle, Cells, Conformation, Cytidine/*analogs, Cytoplasm, Data, derivatives/chemistry/isolation, Fragmentography, Gov't, Hela, Human, Liver/*chemistry, Mass, Molecular, Non-U.S., Nucleic, purification, RNA, Sequence, structure, Support, Transfer


Glasser A. L., el Adlouni C., Keith G., Sochacka E., Malkiewicz A., Santos M., Tuite M. F., Desgres J.

Presence and coding properties of 2'-O-methyl-5-carbamoylmethyluridine (ncm5Um) in the wobble position of the anticodon of tRNA(Leu) (U*AA) from brewer's yeast Journal Article

In: FEBS Lett, vol. 314, no. 3, pp. 381-5, 1992, (0014-5793 Journal Article).

Abstract | BibTeX | Tags: *Anticodon, &, Analysis, cerevisiae/*genetics, Chromatography, derivatives/analysis/chemistry/genetics, Fungal, Fungal/genetics, Gov't, high, Leu/*genetics, liquid, Mass, Molecular, Non-U.S., Pressure, Proteins/biosynthesis, RNA, Saccharomyces, Spectrophotometry, Spectrum, structure, Support, Transfer, Ultraviolet, Uridine/*analogs