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Kowalska J., Martin F., Jemielity J.

Synthetic Capped mRNAs for Cap-Specific Photo-Cross-Linking Experiments. Incollection

In: Rhoads, R. (Ed.): Synthetic mRNA: Production, Introduction Into Cells, and Physiological Consequences, vol. 1428, pp. 31-43, Springer Protocols, Humana Press, 2016.

Abstract | BibTeX | Tags: 5′, 6-thioguanosine, analogs, Binding, Cap, ERIANI, Histone, mRNA, Photo-cross-linking, stability, Transcription


Burnouf D. Y., Olieric V., Wagner J., Fujii S., Reinbolt J., Fuchs R. P., Dumas P.

Structural and biochemical analysis of sliding clamp/ligand interactions suggest a competition between replicative and translesion DNA polymerases Journal Article

In: J Mol Biol, vol. 335, no. 5, pp. 1187-97, 2004, (0022-2836 Journal Article).

Abstract | BibTeX | Tags: *Binding, Antigen/metabolism, Bacterial/genetics, beta/*chemistry/genetics/*metabolism, Binding, Cell, coli/*enzymology, Competitive, Crystallization, DNA, DUMAS, Escherichia, Fragments/*metabolism, I/metabolism, III/metabolism, Kinetics, ligands, Models, Molecular, Nuclear, Peptide, Polymerase, Proliferating, Protein, Proteins/chemistry/metabolism, Recombinant, Replication/*genetics, Subunits


Perederina A., Nevskaya N., Nikonov O., Nikulin A., Dumas P., Yao M., Tanaka I., Garber M., Gongadze G., Nikonov S.

Detailed analysis of RNA-protein interactions within the bacterial ribosomal protein L5/5S rRNA complex Journal Article

In: RNA, vol. 8, no. 12, pp. 1548-57, 2002, (1355-8382 Journal Article).

Abstract | BibTeX | Tags: 5S/*chemistry/*metabolism, Acid, Amino, Bacterial, Base, Binding, Bonding, coli/genetics, Conformation, Data, Escherichia, Fragments/chemistry/metabolism, Gov't, Hydrogen, Models, Molecular, Non-U.S., Nucleic, Peptide, Protein, Proteins/*chemistry/*metabolism, Proteins/chemistry/metabolism, Ribosomal, RNA, Sequence, Sites, Support


Moine H., Mandel J. L.

Biomedicine. Do G quartets orchestrate fragile X pathology? Journal Article

In: Science, vol. 294, no. 5551, pp. 2487-8, 2001, (0036-8075 Journal Article).

BibTeX | Tags: Acid, Analysis, Animals, Array, Binding, Brain/metabolism, Conformation, Crystallography, Expression, Fragile, Gene, Genetic, Human, Messenger/*chemistry/genetics/*metabolism, Mice, Nerve, Nucleic, Oligonucleotide, Protein, Proteins/chemistry/genetics/*metabolism, Regions, Regulation, RNA, Sequence, Sites, structure, Synapses/physiology, Syndrome/genetics/*metabolism, Tertiary, Tissue, Translation, Untranslated, X, X-Ray

Wilhelm M., Uzun O., Mules E. H., Gabriel A., Wilhelm F. X.

Polypurine tract formation by Ty1 RNase H Journal Article

In: J Biol Chem, vol. 276, no. 50, pp. 47695-701, 2001, (0021-9258 Journal Article).

Abstract | BibTeX | Tags: *Purines, *Retroelements, Base, Binding, Calf, Data, DNA, DNA/metabolism, Factors, Gov't, H, Hydrolysis, Molecular, Mutation, Non-U.S., P.H.S., Polymerase/*chemistry/*metabolism, Primers/pharmacology, Protein, Proteins/metabolism, Recombinant, Ribonuclease, RNA-Directed, RNA/metabolism, Sequence, Sites, Support, Thymus/*chemistry/*genetics/metabolism, time, U.S.


Friant S., Heyman T., Bystrom A. S., Wilhelm M., Wilhelm F. X.

Interactions between Ty1 retrotransposon RNA and the T and D regions of the tRNA(iMet) primer are required for initiation of reverse transcription in vivo Journal Article

In: Mol Cell Biol, vol. 18, no. 2, pp. 799-806, 1998, (0270-7306 Journal Article).

Abstract | BibTeX | Tags: *Retroelements, *Transcription, Acid, Base, Binding, cerevisiae, Conformation, Data, DNA, Fungal/*metabolism, Fungal/biosynthesis, Genetic, Gov't, Met/*metabolism, Molecular, Mutagenesis, Non-U.S., Nucleic, Primers, Replication, RNA, Saccharomyces, Sequence, Sites, Support, Transfer

Gabus C., Ficheux D., Rau M., Keith G., Sandmeyer S., Darlix J. L.

The yeast Ty3 retrotransposon contains a 5'-3' bipartite primer-binding site and encodes nucleocapsid protein NCp9 functionally homologous to HIV-1 NCp7 Journal Article

In: EMBO J, vol. 17, no. 16, pp. 4873-80, 1998, (0261-4189 Journal Article).

Abstract | BibTeX | Tags: *Capsid, *Retroelements, Acid, Base, Binding, Capsid/*genetics, cerevisiae/*genetics, dimerization, gag/*genetics, Gene, Gov't, Homology, Met/genetics/*metabolism, Non-U.S., Nucleic, P.H.S., Products, Proteins, RNA, Saccharomyces, Sequence, Sites, Support, Transfer, U.S.


Bergdoll M., Remy M. H., Cagnon C., Masson J. M., Dumas P.

Proline-dependent oligomerization with arm exchange Journal Article

In: Structure, vol. 5, no. 3, pp. 391-401, 1997, (0969-2126 Journal Article).

Abstract | BibTeX | Tags: *Acetyltransferases, *Dimerization, *Protein, Acid, Alignment, Amino, Aminotransferases/chemistry, Animals, Aspartate, ATPase/chemistry, Bacterial, Binding, Cattle, Chickens, Comparative, Conformation, Data, Folding, Heart/enzymology, Human, mitochondria, Models, Molecular, Mutagenesis, Na(+)-K(+)-Exchanging, Pancreatic/chemistry, Plant, Proline/*physiology, Protein, Proteins/chemistry, Pyrophosphatases/chemistry, Ribonuclease, Sequence, Site-Directed, Structural, Study, Viral, Viruses/chemistry


Gabryszuk J., Keith G., Monko M., Kuligowska E., Dirheimer G., Szarkowski J. W., Przykorska A.

Structural specificity of nuclease from wheat chloroplasts stroma Journal Article

In: Nucleic Acids Symp Ser, no. 33, pp. 115-9, 1995, (0261-3166 Journal Article).

Abstract | BibTeX | Tags: &, Acid, Asp/chemistry/genetics/metabolism, Base, Binding, Chloroplasts/*enzymology, Conformation, Data, Endonucleases/isolation, Fungal/chemistry/genetics/metabolism, Gov't, Molecular, Non-U.S., Nucleic, Phe/chemistry/genetics/metabolism, purification/*metabolism, RNA, RNA/chemistry/metabolism, Sequence, Sites, Specificity, Substrate, Support, Transfer, Triticum/*enzymology


Dumas P., Bergdoll M., Cagnon C., Masson J. M.

Crystal structure and site-directed mutagenesis of a bleomycin resistance protein and their significance for drug sequestering Journal Article

In: EMBO J, vol. 13, no. 11, pp. 2483-92, 1994, (0261-4189 Journal Article).

Abstract | BibTeX | Tags: *Acetyltransferases, &, Acid, Amino, Bacterial, Bacterial/*genetics, Base, Binding, Bleomycin/*metabolism/pharmacology, Conformation, Crystallization, Crystallography, Data, Drug, Fusion, Genes, Gov't, Microbial/genetics, Models, Molecular, Mutagenesis, Non-U.S., Protein, Proteins/*chemistry/genetics/isolation, Proteins/isolation, purification, purification/metabolism, Recombinant, Relationship, Resistance, Secondary, Sequence, Site-Directed, Sites, Structural, structure, Structure-Activity, Support, X-Ray

Wilhelm M., Wilhelm F. X., Keith G., Agoutin B., Heyman T.

Yeast Ty1 retrotransposon: the minus-strand primer binding site and a cis-acting domain of the Ty1 RNA are both important for packaging of primer tRNA inside virus-like particles Journal Article

In: Nucleic Acids Res, vol. 22, no. 22, pp. 4560-5, 1994, (0305-1048 Journal Article).

Abstract | BibTeX | Tags: Acid, Amino, Base, Binding, cerevisiae/*genetics, Cloning, Data, Fungal/*genetics, Genetic, Gov't, Met/*genetics, Molecular, Mutation/physiology, Non-U.S., Retroelements/*genetics/physiology, Retroviridae/genetics, RNA, RNA/*genetics, Saccharomyces, Sequence, Sites, Support, Transcription, Transfer