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129 entries « 2 of 3 »

2014

Tomasini A, François P, Howden B P, Fechter P, Romby P, Caldelari I

The importance of regulatory RNAs in Staphylococcus aureus. Journal Article

In: Infect Genet Evol, vol. 21, no. C, pp. 616-626, 2014, ISBN: 24291227.

Abstract | Links | BibTeX | Tags: Regulatory RNA Staphylococcus Virulence, ROMBY, Unité ARN

Sesto N, Touchon M, Andrade J M, Kondo J, Rocha E P, Arraiano C M, Archambaud C, Westhof E, Romby P, Cossart P

A PNPase Dependent CRISPR System in Listeria. Journal Article

In: PLoS Genet, vol. 10, no. 1, pp. e1004065, 2014, ISBN: 24415952.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN, WESTHOF

Romilly C, Lays C, Tomasini A, Caldelari I, Benito Y, Hammann P, Geissmann T, Boisset S, Romby P, Vandenesch F

A Non-Coding RNA Promotes Bacterial Persistence and Decreases Virulence by Regulating a Regulator in Staphylococcus aureus. Journal Article

In: PLoS Pathog, vol. 10, no. 3, pp. e1003979, 2014, ISBN: 24651379.

Abstract | Links | BibTeX | Tags: PPSE, ROMBY, Unité ARN

Majzoub K, Hafirassou M L, Meignin C, Goto A, Marzi S, Fedorova A, Verdier Y, Vinh J, Hoffmann J A, Martin F, Baumert T F, Schuster C, Imler JL

RACK1 Controls IRES-Mediated Translation of Viruses. Journal Article

In: Cell, vol. 159, no. 5, pp. 1086-1095, 2014, ISBN: 25416947.

Abstract | Links | BibTeX | Tags: ERIANI, hoffmann, imler, M3i, meignin, ROMBY, Unité ARN

2013

Duval M, Korepanov A, Fuchsbauer O, Fechter P, Haller A, Fabbretti A, Choulier L, Micura R, Klaholz B P, Romby P, Springer M, Marzi S

Escherichia coli Ribosomal Protein S1 Unfolds Structured mRNAs Onto the Ribosome for Active Translation Initiation. Journal Article

In: PLoS Biol, vol. 11, no. 12, pp. e1001731, 2013, ISBN: 24339747.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Duval M, Romilly C, Helfer A C, Fuchsbauer O, Romby P, Marzi S

Footprinting methods for mapping RNA-protein and RNA-RNA interactions. Incollection

In: Klostermeier, D; Hammann, C (Ed.): RNA Structure and Folding, pp. 29-50, Verlag Walter de Gruyter, Berlin, 2013, ISBN: 9783110284959/ISSN.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Simonetti A, Marzi S, Billas I M, Tsai A, Fabbretti A, Myasnikov A G, Roblin P, Vaiana A C, Hazemann I, Eiler D, Steitz T A, Puglisi J D, Gualerzi C O, Klaholz B P

Involvement of protein IF2 N domain in ribosomal subunit joining revealed from architecture and function of the full-length initiation factor. Journal Article

In: Proc Natl Acad Sci U S A, vol. 110, no. 39, pp. 15656-61, 2013, ISBN: 24029017.

Abstract | Links | BibTeX | Tags: ERIANI, integrated structural biology protein synthesis, ROMBY, Unité ARN

Simonetti A, Marzi S, Fabbretti A, Hazemann I, Jenner L, Urzhumtsev A, Gualerzi C O, Klaholz B P

Structure of the protein core of translation initiation factor 2 in apo, GTP-bound and GDP-bound forms. Journal Article

In: Acta Crystallogr D Biol Crystallogr, vol. 69, no. Pt 6, pp. 925-33, 2013, ISBN: 23695237.

Abstract | Links | BibTeX | Tags: ERIANI, ROMBY, Unité ARN

2012

Song J, Lays C, Vandenesch F, Benito Y, Bes M, Chu Y, Lina G, Romby P, Geissmann T, Boisset S

The Expression of Small Regulatory RNAs in Clinical Samples Reflects the Different Life Styles of Staphylococcus aureus in Colonization vs. Infection. Journal Article

In: PLoS One, vol. 7, no. 5, pp. e37294, 2012, ISBN: 22629378.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Romilly C, Chevalier C, Marzi S, Masquida B, Geissmann T, Vandenesch F, Westhof E, Romby P

Loop-loop interactions involved in antisense regulation are processed by the endoribonuclease III in Staphylococcus aureus. Journal Article

In: RNA Biol, vol. 9, no. 12, pp. 1461-1472, 2012, ISBN: 23134978.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN, WESTHOF

Romilly C, Caldelari I, Parmentier D, Lioliou E, Romby P, Fechter P

Current knowledge on regulatory RNAs and their machineries in Staphylococcus aureus Journal Article

In: RNA Biol, vol. 9, no. 4, pp. 402-413, 2012, ISBN: 22546940.

Abstract | Links | BibTeX | Tags: ROMBY, Staphylococcus aureus Gene regulation Peptides Regulatory RNAs RNA-binding proteins Virulence, Unité ARN

Marzi S, Romby P

RNA mimicry, a decoy for regulatory proteins. Journal Article

In: Mol Microbiol, vol. 83, no. 1, pp. 1-6, 2012, ISBN: 22098101, (Article first published online: 21 NOV 2011).

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Lioliou E, Sharma C M, Caldelari I, Helfer A C, Fechter P, Vandenesch F, Vogel J, Romby P

Global Regulatory Functions of the Staphylococcus aureus Endoribonuclease III in Gene Expression. Journal Article

In: PLoS Genet, vol. 8, no. 6, pp. e1002782, 2012, ISBN: 22761586.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Lioliou E, Romilly C, Geissman T, Vandenesch F, Romby P

RNA-mediated regulation of virulence gene expression: another layer of complexity Book Chapter

In: Filloux, A (Ed.): Bacterial Regulatory Networks, pp. 143-166, Caister Academic Press, Norwich, UK, 2012.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Jester B C, Romby P, Lioliou E

When ribonucleases come into play in pathogens: a survey of gram-positive bacteria. Journal Article

In: Int J Microbiol, vol. 2012, pp. 592196, 2012, ISSN: ISSN: 1687-918X (Print) ISSN: 1687-9198 (Online), (Epub 2012 Mar 13.).

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Caldelari I, Fechter P, Lioliou E, Chevalier C, Gaspin C, Romby P

A current overview of regulatory RNAs in Staphylococcus aureus Book Chapter

In: Marchfelder, A; Hess, W R (Ed.): Regulatory RNAs in prokaryotes, pp. 51-75, SpringerWienNewYork, 2012.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Helfer A C, Romilly C, Chevalier C, Lioliou E, Marzi S, Romby P

Probing RNA Structure In Vitro with Enzymes and Chemicals. Incollection

In: Hartmann, R K; Bindereif, A; Schön, A; Westhof, E (Ed.): Handbook of RNA Biochemistry: Second, Completely Revised and Enlarged Edition, pp. 205-230, Wiley-VCH, 2012, ISBN: 9783527327645 9783527647064/ISSN.

Abstract | Links | BibTeX | Tags: RNA structure probing in vitro in vivo chemical probes enzymatic probing ribonucleases RNases T1, ROMBY, T2, Unité ARN, V1 lead(II)-induced cleavages dimethylsulfate (DMS) diethylpyrocarbonate (DEPC) 1-cyclohexyl-3-(2-morpholinoethyl)carbodiimide metho-p-toluenesulfonate (CMCT) N-ethyl-N-nitrosourea (ENU) N-methylisatoic anhydride (NMIA) 1-methyl-7-nitroisatoic anhydride (1M7) benzoyl cyanide (BzCN)

2011

Simonetti A, Marzi S, Myasnikov A, Menetret J F, Klaholz B P

Insights into translation initiation and termination complexes and into the polysome architecture Book Chapter

In: Rodnina, M; Wintermeyer, W; Green, R (Ed.): Ribosomes Structures, Function, and Dynamics, pp. 113-128, Springer, Wien, 2011.

Abstract | Links | BibTeX | Tags: ENNIFAR, ROMBY, Unité ARN

2010

Giuliodori A M, Pietro F Di, Marzi S, Masquida B, Wagner R, Romby P, Gualerzi C O, Pon C L

The cspA mRNA is a thermosensor that modulates translation of the cold-shock protein CspA Journal Article

In: Mol Cell, vol. 37, no. 1, pp. 21-33, 2010, ISBN: 20129052, (1097-4164 (Electronic) 1097-2765 (Linking) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: 5' Untranslated Regions Acclimatization *Cold Temperature Escherichia coli/*genetics/metabolism Escherichia coli Proteins/genetics/*physiology Gene Expression Regulation, Bacterial Heat-Shock Proteins/genetics/*physiology Models, Genetic Nucleic Acid Conformation *Protein Biosynthesis RNA, Messenger/chemistry/*physiology, ROMBY, Unité ARN, WESTHOF

2009

Simonetti A, Marzi S, Jenner L, Myasnikov A, Romby P, Yusupova G, Klaholz B P, Yusupov M

A structural view of translation initiation in bacteria Journal Article

In: Cell Mol Life Sci, vol. 66, no. 3, pp. 423-436, 2009, ISBN: 19011758, (1420-9071 (Electronic) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Romby P, Marzi S, Westhof E

[The atomic structure of the ribosome into the spotlight] Journal Article

In: Med Sci (Paris), vol. 25, no. 11, pp. 977-981, 2009, ISBN: 19951677, (0767-0974 (Print) 0767-0974 (Linking) Journal Article).

Links | BibTeX | Tags: ROMBY, Unité ARN, WESTHOF

Romby P, Charpentier E

An overview of RNAs with regulatory functions in gram-positive bacteria Journal Article

In: Cell Mol Life Sci, vol. 67, no. 2, pp. 217-237, 2009, ISBN: 19859665, (1420-9071 (Electronic) 1420-682X (Linking) Journal Article Research Support, Non-U.S. Gov't Review).

Abstract | Links | BibTeX | Tags: Bacterial Gram-Positive Bacteria/*genetics/pathogenicity RNA, Bacterial/genetics/*metabolism RNA, Gene Expression Regulation, ROMBY, Unité ARN, Untranslated/genetics/*metabolism Virulence/genetics

Moreno R, Marzi S, Romby P, Rojo F

The Crc global regulator binds to an unpaired A-rich motif at the Pseudomonas putida alkS mRNA coding sequence and inhibits translation initiation Journal Article

In: Nucleic Acids Res, vol. 37, no. 22, pp. 7678-7690, 2009, ISBN: 19825982, (1362-4962 (Electronic) 0305-1048 (Linking) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: 5' Untranslated Regions Bacterial Proteins/genetics/*metabolism Binding Sites Nucleic Acid Conformation *Peptide Chain Initiation, Messenger/chemistry/metabolism Repressor Proteins/*metabolism Trans-Activators/*genetics, ROMBY, Translational Pseudomonas putida/*genetics RNA, Unité ARN

Geissmann T, Marzi S, Romby P

The role of mRNA structure in translational control in bacteria Journal Article

In: RNA Biol, vol. 6, no. 2, pp. 153-160, 2009, ISBN: 19885993, (1555-8584 (Electronic) 1547-6286 (Linking) Journal Article Research Support, Non-U.S. Gov't Review).

Abstract | Links | BibTeX | Tags: Amino Acid, Amino Acid Sequence Bacteria/*genetics Bacterial Proteins/chemistry/genetics Molecular Sequence Data *Nucleic Acid Conformation *Protein Biosynthesis RNA, Messenger/*chemistry Sequence Homology, ROMBY, Unité ARN

Geissmann T, Chevalier C, Cros M J, Boisset S, Fechter P, Noirot C, Schrenzel J, Francois P, Vandenesch F, Gaspin C, Romby P

A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation Journal Article

In: Nucleic Acids Res, vol. 37, no. 21, pp. 7239-7257, 2009, ISBN: 19786493, (1362-4962 (Electronic) 0305-1048 (Linking) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: Bacillus subtilis/genetics/metabolism Base Sequence Computational Biology Conserved Sequence Gene Expression Profiling *Gene Expression Regulation, Bacterial Molecular Sequence Data Proteomics RNA Stability RNA, Genetic, Messenger/metabolism RNA, ROMBY, Unité ARN, Untranslated/*chemistry/genetics/metabolism Staphylococcus aureus/*genetics Transcription

Fechter P, Chevalier C, Yusupova G, Yusupov M, Romby P, Marzi S

Ribosomal initiation complexes probed by toeprinting and effect of trans-acting translational regulators in bacteria Book Chapter

In: Serganov, A (Ed.): Riboswitches: Methods and Protocols, vol. 540, pp. 247-263, Springer Protocols, Humana Press, 2009, ISBN: 19381565.

Abstract | Links | BibTeX | Tags: Bacteria/*genetics/*metabolism Bacterial Proteins/*metabolism Base Sequence Escherichia coli/metabolism Molecular Biology/*methods Molecular Sequence Data *Peptide Chain Initiation, Bacterial/chemistry/genetics Ribosomes/*metabolism Staphylococcus aureus/metabolism Thermus thermophilus/metabolism, ROMBY, Translational RNA, Unité ARN

Chevalier C, Geissmann T, Helfer A C, Romby P

Probing mRNA structure and sRNA-mRNA interactions in bacteria using enzymes and lead(II) Book Chapter

In: Serganov, A (Ed.): Riboswitches: Methods and Protocols, vol. 540, pp. 215-232, Springer Protocols, Humana Press, 2009, ISBN: 19381563.

Abstract | Links | BibTeX | Tags: Bacterial/chemical synthesis RNA, Base Sequence Chemical Fractionation Enzymes/*metabolism Hydrolysis/drug effects Lead/*pharmacology Molecular Biology/*methods Molecular Sequence Data Nucleic Acid Conformation/drug effects RNA/metabolism RNA, Messenger/*chemistry/genetics/*metabolism RNA, ROMBY, Unité ARN, Untranslated/chemistry/genetics/*metabolism Staphylococcus aureus/drug effects/*metabolism

Benelli D, Marzi S, Mancone C, Alonzi T, la Teana A, Londei P

Function and ribosomal localization of aIF6, a translational regulator shared by archaea and eukarya Journal Article

In: Nucleic Acids Res, vol. 37, no. 1, pp. 256-267, 2009, ISBN: 19036786, (1362-4962 (Electronic) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: 23S/chemistry/metabolism Ribosomal Proteins/metabolism Ribosome Subunits, Archaeal Proteins/analysis/chemistry/*metabolism Base Sequence Binding Sites Cell Cycle Cloning, Archaeal/*metabolism Ribosomes/metabolism Sulfolobus solfataricus/*genetics/metabolism, Large, Molecular Eukaryotic Initiation Factors/chemistry Models, Molecular Molecular Sequence Data Prokaryotic Initiation Factors/analysis/chemistry/*metabolism *Protein Biosynthesis RNA, Ribosomal, ROMBY, Unité ARN

Myasnikov A G, Simonetti A, Marzi S, Klaholz B P

Structure-function insights into prokaryotic and eukaryotic translation initiation Journal Article

In: Curr Opin Struct Biol, vol. 19, no. 3, pp. 300-9, 2009, ISBN: 19493673, (1879-033X (Electronic) 0959-440X (Linking) Journal Article Research Support, Non-U.S. Gov't Review).

Abstract | Links | BibTeX | Tags: Amino Acid Sequence Eukaryotic Cells/*chemistry/*metabolism Humans Molecular Sequence Data *Peptide Chain Initiation, mino Acid Sequence Eukaryotic Cells/*chemistry/*metabolism Humans Molecular Sequence Data *Peptide Chain Initiation, ROMBY, Transfer/chemistry/metabolism Ribosomes/chemistry/genetics/metabolism, Translational Peptide Initiation Factors/chemistry/metabolism Prokaryotic Cells/*chemistry/*metabolism RNA, Unité ARN

Leclerc V, Caldelari I, Veresceaghina N, Reichhart J-M

Phagocytosis in Drosophila melanogaster Immune Response. Incollection

In: Phagocyte-pathogen Interactions, vol. 33, pp. 513–521, DG Russel and S. Gordon, Whasington, DC, 2009.

BibTeX | Tags: M3i, reichhart, ROMBY, Unité ARN

2008

Chamy L El, Leclerc V, Caldelari I, Reichhart J-M

Sensing of 'danger signals' and pathogen-associated molecular patterns defines binary signaling pathways 'upstream' of Toll Journal Article

In: Nat. Immunol., vol. 9, no. 10, pp. 1165–1170, 2008, ISSN: 1529-2916.

Abstract | Links | BibTeX | Tags: Animals, Fungi, Genetically Modified, Gram-Positive Bacteria, Gram-Positive Bacterial Infections, In Situ Hybridization, M3i, Mycoses, Pattern Recognition, Peptide Hydrolases, Receptors, reichhart, ROMBY, Serine Endopeptidases, Signal Transduction, Toll-Like Receptors, Unité ARN

Romby P, Wagner E G

Exploring the complex world of RNA regulation Journal Article

In: Biol Cell, vol. 100, no. 1, pp. e1-3, 2008, ISBN: 18072939, (1768-322X (Electronic) Editorial).

Links | BibTeX | Tags: ROMBY, Unité ARN

Marzi S, Fechter P, Chevalier C, Romby P, Geissmann T

RNA switches regulate initiation of translation in bacteria Journal Article

In: Biol Chem, vol. 389, no. 5, pp. 585-598, 2008, ISBN: 18953726, (1431-6730 (Print) Journal Article Research Support, Non-U.S. Gov't Review).

Abstract | Links | BibTeX | Tags: Animals Bacteria/*genetics Genes, Bacterial/genetics/*immunology RNA, Messenger/biosynthesis/genetics Ribosomes/immunology, ROMBY, Switch/genetics/*immunology Humans Peptide Chain Initiation, Translational/genetics/*immunology Protein Biosynthesis/genetics/*immunology RNA, Unité ARN

Fechter P, Romby P

Footprinting Book Chapter

In: Muller, S (Ed.): Nucleic Acids from A to Z: a concise encyclopedia, pp. 109, WILEY-VCH Verlag GmbH & Co, 2008.

Links | BibTeX | Tags: ROMBY, Unité ARN

Fechter P, Romby P

Chemical and enzymatic structure mapping of RNAs Book Chapter

In: Muller, S (Ed.): Nucleic Acids from A to Z: a concise encyclopedia, pp. 41-43, WILEY-VCH Verlag GmbH & Co, 2008.

Links | BibTeX | Tags: ROMBY, Unité ARN

Chevalier C, Huntzinger E, Fechter P, Boisset S, Vandenesch F, Romby P, Geissmann T

Staphylococcus aureus endoribonuclease III purification and properties Journal Article

In: Methods Enzymol, vol. 447, pp. 309-327, 2008, ISBN: 19161850, (1557-7988 (Electronic) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Simonetti A, Marzi S, Myasnikov A G, Fabbretti A, Yusupov M, Gualerzi C O, Klaholz B P

Structure of the 30S translation initiation complex Journal Article

In: Nature, vol. 455, no. 7211, pp. 416-420, 2008, ISBN: 18758445, (1476-4687 (Electronic) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: Cryoelectron Microscopy Crystallography, Messenger/chemistry/genetics/metabolism RNA, Met/chemistry/genetics/metabolism/ultrastructure Ribosome Subunits/chemistry/metabolism/ultrastructure Ribosomes/chemistry/*metabolism/*ultrastructure Thermus thermophilus/*enzymology/genetics/*ultrastructure, Molecular Multiprotein Complexes/*chemistry/genetics/metabolism/*ultrastructure *Peptide Chain Initiation, ROMBY, Transfer, Translational Prokaryotic Initiation Factor-1/chemistry/genetics/metabolism/ultrastructure Prokaryotic Initiation Factor-2/chemistry/genetics/metabolism/ultrastructure Protein Conformation RNA, Unité ARN, X-Ray Guanosine Triphosphate/chemistry/metabolism Models

Simonetti A, Marzi S, Myasnikov A, Fabbretti A, Yusupov M, Gualerzi C, Klaholz B

Purification of T. thermophilus translation initiation factors and characterization of the corresponding ribosome complexes by filter-binding assays Miscellaneous

2008.

Links | BibTeX | Tags: filter-binding assay, IF1, IF2, initiation factor purification, Ribosome, ROMBY, Thermus thermophilus, translation initiation, Unité ARN

2007

Mandin P., Repoila F., Vergassola M., Geissmann T., Cossart P.

Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets Journal Article

In: Nucleic Acids Res, vol. 35, no. 3, pp. 962-74, 2007, (1362-4962 (Electronic) Journal Article Research Support, Non-U.S. Gov't).

Abstract | BibTeX | Tags: 5', Assay, Bacterial, Base, Biology, Computational, Data, DNA, Electrophoretic, Flanking, Genes, Genomics, Intergenic/chemistry, Listeria, Messenger/chemistry/*metabolism, Mobility, Molecular, monocytogenes/*genetics/metabolism, Region, RNA, ROMBY, Sequence, Shift, Untranslated/analysis/*genetics/metabolism

Marzi S, Romby P, Klaholz B P

[Twisting of mRNA reversibly blocks its translation by the ribosome] Journal Article

In: Med Sci (Paris), vol. 23, no. 10, pp. 881-3, 2007, ISBN: 17937901, (0767-0974 (Print) News).

Links | BibTeX | Tags: ROMBY, Unité ARN

Marzi S, Myasnikov A G, Serganov A, Ehresmann C, Romby P, Yusupov M, Klaholz B P

Structured mRNAs regulate translation initiation by binding to the platform of the ribosome Journal Article

In: Cell, vol. 130, no. 6, pp. 1019-31, 2007, ISBN: 17889647, (0092-8674 (Print) Comparative Study Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: 5' Untranslated Regions Amino Acid Sequence Base Sequence Binding Sites Cryoelectron Microscopy Escherichia coli/*genetics/metabolism Escherichia coli Proteins/chemistry/genetics/*metabolism *Gene Expression Regulation, Amino Acid Sequence Homology, Bacterial Models, Bacterial/chemistry/*metabolism RNA, Messenger/*metabolism RNA, Molecular Molecular Sequence Data Mutation Nucleic Acid Conformation *Peptide Chain Initiation, Nucleic Acid Structural Homology, Protein Time Factors, Ribonucleic Acid Ribosomal Proteins/chemistry/genetics/*metabolism Ribosomes/chemistry/*metabolism/ultrastructure Sequence Homology, ROMBY, Transfer/metabolism Regulatory Sequences, Translational Protein Binding Protein Conformation RNA, Unité ARN

Maone E, Stefano M Di, Berardi A, Benelli D, Marzi S, Teana A La, Londei P

Functional analysis of the translation factor aIF2/5B in the thermophilic archaeon Sulfolobus solfataricus Journal Article

In: Mol Microbiol, vol. 65, no. 3, pp. 700-13, 2007, ISBN: 17608795, (0950-382X (Print) 0950-382X (Linking) Journal Article Research Support, Non-U.S. Gov't).

Abstract | Links | BibTeX | Tags: Archaeal Hydrolysis Peptide Chain Initiation, Met/metabolism Recombinant Fusion Proteins/metabolism Ribosomes/metabolism Sulfolobus solfataricus/genetics/*metabolism, Molecular Conserved Sequence GTP Phosphohydrolases/metabolism Gene Expression Genes, ROMBY, Secondary RNA, Transfer, Translational Peptide Initiation Factors/chemistry/isolation & purification/*metabolism Protein Binding *Protein Biosynthesis Protein Structure, Unité ARN

2006

Romby P, Vandenesch F, Wagner E G

The role of RNAs in the regulation of virulence-gene expression Journal Article

In: Curr Opin Microbiol, vol. 9, no. 2, pp. 229-236, 2006, ISBN: 16529986, (1369-5274 (Print) Journal Article).

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Geissmann T, Possedko M, Huntzinger E, Fechter P, Ehresmann C, Romby P

Regulatory RNAs as mediators of virulence gene expression in bacteria Book Chapter

In: Hofmann, F B (Ed.): Handbook of Experimental Pharmacology, vol. 173, pp. 9-43, Springer, 2006, ISBN: 16594609.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

2005

Myasnikov A G, Marzi S, Simonetti A, Giuliodori A M, Gualerzi C O, Yusupova G, Yusupov M, Klaholz B P

Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome Journal Article

In: Nat Struct Mol Biol, vol. 12, no. 12, pp. 1145-1149, 2005, ISBN: 16284619, (1545-9993 Journal article).

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Huntzinger E, Winter F, Moine H, Ehresmann C, Romby P

Probing RNA structures with enzymes and chemicals in vitro and in vivo Book Chapter

In: Hartmann, R K; Bindereif, A; Schon, A; Westhof, E (Ed.): Handbook of RNA biochemistry, vol. 1, pp. 151-171, Wiley-Vch Verlag, 2005.

Links | BibTeX | Tags: ROMBY, ROMBY thiouridine 6-thioguanosine structures relationships variants, Unité ARN

Huntzinger E, Boisset S, Saveanu C, Benito Y, Geissmann T, Namane A, Lina G, Etienne J, Ehresmann B, Ehresmann C, Jacquier A, Vandenesch F, Romby P

Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression Journal Article

In: EMBO J, vol. 24, no. 4, pp. 824-835, 2005, ISBN: 15678100, (0261-4189 Journal Article).

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

Jenner L, Romby P, Rees B, Schulze-Briese C, Springer M, Ehresmann C, Ehresmann B, Moras D, Yusupova G, Yusupov M

Translational operator of mRNA on the ribosome: how repressor proteins exclude ribosome binding Journal Article

In: Science, vol. 308, no. 5718, pp. 120-123, 2005, ISBN: 15802605, (1095-9203 Journal Article).

Abstract | Links | BibTeX | Tags: 16S/chemistry/metabolism RNA, Bacterial/*chemistry/metabolism RNA, Messenger/*chemistry/metabolism RNA, Met/chemistry/metabolism *Regulatory Sequences, Molecular Nucleic Acid Conformation *Protein Biosynthesis RNA, Non-U.S. Gov't Ribosomal Proteins/metabolism Ribosomes/*metabolism Thermus thermophilus/genetics/*metabolism Threonine-tRNA Ligase/genetics/metabolism, Ribonucleic Acid Repressor Proteins/*metabolism Research Support, Ribosomal, ROMBY, ROMBY Bacterial Proteins/metabolism Base Pairing Binding Sites Crystallization Crystallography, Transfer, Unité ARN, X-Ray Fourier Analysis Models

Dock-Bregeon A C, Romby P, Springer M

Threonyl-tRNA synthetase: a multifunctional enzyme in E.coli. Book Chapter

In: Ibba, M; Francklyn, C; Cusack, S (Ed.): The aminoacyl-tRNA synthetases, pp. 163-176, Landes Bioscience, 2005.

Abstract | Links | BibTeX | Tags: ROMBY, Unité ARN

2003

Romby P, Springer M

Bacterial translational control at atomic resolution Journal Article

In: Trends Genet, vol. 19, no. 3, pp. 155-161, 2003, ISBN: 12615010, (0168-9525 Journal Article Review Review, Tutorial).

Abstract | Links | BibTeX | Tags: Bacterial *Gene Expression Regulation, Bacterial Models, Base Sequence Conserved Sequence Escherichia coli/*enzymology/*genetics *Gene Expression Regulation, Biological Models, Enzymologic Genes, Genetic, Messenger/genetics/*metabolism RNA, Molecular Molecular Mimicry Nucleic Acid Conformation Operator Regions (Genetics) RNA, Non-U.S. Gov't Threonine-tRNA Ligase/chemistry/*genetics/metabolism *Translation, ROMBY, Thr/*metabolism RNA-Binding Proteins/metabolism Support, Transfer, Unité ARN

129 entries « 2 of 3 »