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2004

Zhang H, Kolb F A, Jaskiewicz L, Westhof E, Filipowicz W

Single processing center models for human Dicer and bacterial RNase III Journal Article

In: Cell, vol. 118, no. 1, pp. 57-68, 2004, ISBN: 15242644, (0092-8674 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence Base Sequence Comparative Study Conserved Sequence Dimerization Endoribonucleases/*chemistry/genetics/isolation & purification/*metabolism Escherichia coli/enzymology Human Manganese/metabolism MicroRNAs/metabolism Models, Double-Stranded/chemistry/*metabolism RNA, Molecular Molecular Sequence Data Molecular Weight Mutagenesis, Non-U.S. Gov't, Post-Transcriptional RNA, Secondary Protein Structure, Site-Directed Mutation Protein Structure, Small Interfering/metabolism Recombinant Proteins/metabolism Ribonuclease III/*chemistry/genetics/isolation & purification/*metabolism Sequence Homology, Tertiary RNA Helicases/*chemistry/genetics/isolation & purification/*metabolism *RNA Processing, Unité ARN, WESTHOF

Jaeger S, Eriani G, Martin F

Critical residues for RNA discrimination of the histone hairpin binding protein (HBP) investigated by the yeast three-hybrid system Journal Article

In: FEBS Lett, vol. 556, no. 1-3, pp. 265-270, 2004, ISBN: 14706861, (0014-5793 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence Amino Acid Substitution Base Sequence Carrier Proteins/chemistry/*genetics/*metabolism Histones/genetics Human Lac Operon/genetics Molecular Sequence Data Nucleic Acid Conformation Nucleotides/chemistry/genetics/metabolism RNA/chemistry/genetics/*metabolism RNA, ERIANI, Messenger/chemistry/genetics/metabolism RNA-Binding Proteins/chemistry/genetics/metabolism Recombinant Fusion Proteins/chemistry/genetics/metabolism Saccharomyces cerevisiae/*genetics Sequence Alignment Sequence Homology, Non-U.S. Gov't Two-Hybrid System Techniques beta-Galactosidase/genetics/metabolism, Unité ARN

Campanacci V, Dubois D Y, Becker H D, Kern D, Spinelli S, Valencia C, Pagot F, Salomoni A, Grisel S, Vincentelli R, Bignon C, Lapointe J, Giege R, Cambillau C

The Escherichia coli YadB gene product reveals a novel aminoacyl-tRNA synthetase like activity Journal Article

In: J Mol Biol, vol. 337, no. 2, pp. 273-283, 2004, ISBN: 15003446, (0022-2836 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Bacterial Glutamate-tRNA Ligase/chemistry/genetics/metabolism Glutamic Acid/metabolism Kinetics Ligands Models, Glu/metabolism Sequence Homology, KERN GIEGE Adenosine Monophosphate/metabolism Adenosine Triphosphate/metabolism Amino Acid Sequence Amino Acyl-tRNA Ligases/chemistry/*genetics/*metabolism Carrier Proteins/metabolism Crystallography, Molecular Molecular Sequence Data Neoplasm Proteins/metabolism Nuclear Proteins/metabolism Protein Conformation RNA, Non-U.S. Gov't Thermus thermophilus/enzymology/genetics Zinc/metabolism, Transfer, Unité ARN, X-Ray Escherichia coli/*enzymology/*genetics Escherichia coli Proteins/chemistry/*genetics/*metabolism Genes

2003

Sauter C, Basquin J, Suck D

Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coli Journal Article

In: Nucleic Acids Res, vol. 31, no. 14, pp. 4091-4098, 2003, ISBN: 12853626, (1362-4962 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence Bacteria/*genetics Crystallography, FRUGIER, Molecular Host Factor 1 Protein/chemistry/*genetics Molecular Sequence Data Protein Conformation Protein Structure, Non-U.S. Gov't, SAUTER, Secondary Ribonucleoproteins, Small Nuclear/chemistry/*genetics Sequence Alignment Sequence Homology, Unité ARN, X-Ray Dimerization Escherichia coli Proteins/chemistry/*genetics Evolution

Charron C, Roy H, Blaise M, Giege R, Kern D

Non-discriminating and discriminating aspartyl-tRNA synthetases differ in the anticodon-binding domain Journal Article

In: EMBO J, vol. 22, no. 7, pp. 1632-1643, 2003, ISBN: 12660169, (0261-4189 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence *Anticodon Aspartate-tRNA Ligase/chemistry/*metabolism Binding Sites Models, Molecular Molecular Sequence Data Protein Conformation Pyrococcus/enzymology Sequence Homology, Non-U.S. Gov't Thermus thermophilus/enzymology, Unité ARN

2002

Lescure A, Allmang C, Yamada K, Carbon P, Krol A

cDNA cloning, expression pattern and RNA binding analysis of human selenocysteine insertion sequence (SECIS) binding protein 2 Journal Article

In: Gene, vol. 291, no. 1-2, pp. 279-285, 2002, ISBN: 12095701, (0378-1119 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence Blotting, Complementary/chemistry/genetics Female Gene Expression Human Male Molecular Sequence Data Peptide Elongation Factors/metabolism Protein Binding RNA/*metabolism RNA, DNA Sequence Homology, ERIANI, LESCURE, Messenger/genetics/metabolism RNA-Binding Proteins/genetics/*metabolism Sequence Alignment Sequence Analysis, Molecular DNA, Non-U.S. Gov't, Northern Cloning, Unité ARN

2000

Wilhelm M, Boutabout M, Wilhelm F X

Expression of an active form of recombinant Ty1 reverse transcriptase in Escherichia coli: a fusion protein containing the C-terminal region of the Ty1 integrase linked to the reverse transcriptase-RNase H domain exhibits polymerase and RNase H activities Journal Article

In: Biochem J, vol. 348, no. Pt 2, pp. 337-342, 2000, ISBN: 10816427, (0264-6021 Journal Article).

Abstract | Links | BibTeX | Tags: Affinity Cloning, Amino Acid Support, Amino Acid Sequence Chromatography, Calf Thymus/isolation & purification/*metabolism Saccharomyces cerevisiae/*enzymology/*genetics Sequence Alignment Sequence Homology, Genetic, Molecular Codon, Non-U.S. Gov't Templates, Unité ARN

Fagegaltier D, Hubert N, Yamada K, Mizutani T, Carbon P, Krol A

Characterization of mSelB, a novel mammalian elongation factor for selenoprotein translation Journal Article

In: EMBO J, vol. 19, no. 17, pp. 4796-4805, 2000, ISBN: 10970870, (0261-4189 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence Animals Bacterial Proteins/chemistry/*metabolism/physiology Caenorhabditis elegans/genetics Drosophila/genetics Hela Cells Human Mice Molecular Sequence Data Peptide Elongation Factors/chemistry/*metabolism/physiology Protein Binding Proteins/*genetics RNA, Amino Acyl/metabolism Sequence Homology, Genetic/*physiology, Non-U.S. Gov't Translation, Transfer, Unité ARN

Becker H D, Roy H, Moulinier L, Mazauric M H, Keith G, Kern D

Thermus thermophilus contains an eubacterial and an archaebacterial aspartyl-tRNA synthetase Journal Article

In: Biochemistry, vol. 39, no. 12, pp. 3216-3230, 2000, ISBN: 10727213, (0006-2960 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Asn/genetics/metabolism RNA, Asp/metabolism Sequence Alignment Sequence Homology, Molecular Consensus Sequence Escherichia coli/enzymology/genetics Human Kinetics Molecular Sequence Data Peptide Fragments/chemistry RNA, Non-U.S. Gov't Support, P.H.S. Thermus thermophilus/*enzymology/genetics, Transfer, U.S. Gov't, Unité ARN

1999

Sankaranarayanan R, Dock-Bregeon A C, Romby P, Caillet J, Springer M, Rees B, Ehresmann C, Ehresmann B, Moras D

The structure of threonyl-tRNA synthetase-tRNA(Thr) complex enlightens its repressor activity and reveals an essential zinc ion in the active site Journal Article

In: Cell, vol. 97, no. 3, pp. 371-381, 1999, ISBN: 10319817, (0092-8674 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acyl/*chemistry/genetics/*metabolism Sequence Homology, Messenger/genetics RNA, Non-U.S. Gov't Zinc/*chemistry, ROMBY, Secondary Protein Structure, Tertiary RNA, Transfer, Unité ARN

1997

Serganov A, Rak A, Garber M, Reinbolt J, Ehresmann B, Ehresmann C, Grunberg-Manago M, Portier C

Ribosomal protein S15 from Thermus thermophilus--cloning, sequencing, overexpression of the gene and RNA-binding properties of the protein Journal Article

In: Eur J Biochem, vol. 246, no. 2, pp. 291-300, 1997, ISBN: 9208917, (0014-2956 Journal Article).

Abstract | Links | BibTeX | Tags: 16S/metabolism RNA-Binding Proteins/*genetics/metabolism Ribosomal Proteins/*genetics/metabolism Sequence Homology, Amino Acid Support, Amino Acid Sequence Base Sequence Cloning, Bacterial Escherichia coli/genetics Molecular Sequence Data Plasmids RNA, Molecular DNA, Non-U.S. Gov't Thermus thermophilus/*genetics, Ribosomal, Unité ARN

1996

Simos G, Segref A, Fasiolo F, Hellmuth K, Shevchenko A, Mann M, Hurt E C

The yeast protein Arc1p binds to tRNA and functions as a cofactor for the methionyl- and glutamyl-tRNA synthetases Journal Article

In: EMBO J, vol. 15, no. 19, pp. 5437-5448, 1996, ISBN: 8895587, (0261-4189 Journal Article).

Abstract | Links | BibTeX | Tags: Acylation Amino Acid Sequence Cytoplasm/chemistry Genes, Amino Acid Support, Fungal/genetics Glutamate-tRNA Ligase/*metabolism Kinetics Membrane Proteins/metabolism Methionine-tRNA Ligase/*metabolism Molecular Sequence Data Mutation Nuclear Envelope/metabolism RNA, Non-U.S. Gov't Yeasts/enzymology/*genetics/growth & development, Transfer/*metabolism RNA-Binding Proteins/analysis/genetics/*metabolism Recombinant Fusion Proteins/metabolism *Saccharomyces cerevisiae Proteins Sequence Homology, Unité ARN

1995

Schuster C, Myslinski E, Krol A, Carbon P

Staf, a novel zinc finger protein that activates the RNA polymerase III promoter of the selenocysteine tRNA gene Journal Article

In: EMBO J, vol. 14, no. 15, pp. 3777-3787, 1995, ISBN: 7641696, (0261-4189 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence Animals Base Sequence Cloning, Amino Acid-Specific/*genetics Recombinant Fusion Proteins/metabolism Sequence Analysis, DNA Sequence Homology, Messenger RNA, Molecular DNA/metabolism DNA-Binding Proteins/biosynthesis/genetics/*metabolism Gene Expression Genes, Non-U.S. Gov't Trans-Activation (Genetics)/*physiology Trans-Activators/biosynthesis/genetics/*metabolism Xenopus laevis *Zinc Fingers, Reporter Human Molecular Sequence Data Oocytes Promoter Regions (Genetics)/*genetics RNA Polymerase III/*genetics RNA, Transfer, Unité ARN

Logan D T, Mazauric M H, Kern D, Moras D

Crystal structure of glycyl-tRNA synthetase from Thermus thermophilus Journal Article

In: EMBO J, vol. 14, no. 17, pp. 4156-4167, 1995, ISBN: 7556056, (0261-4189 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence Binding Sites Comparative Study Crystallography, Bacterial Glycine-tRNA Ligase/*chemistry/genetics/isolation & purification Macromolecular Systems Models, Molecular Molecular Sequence Data Polymerase Chain Reaction *Protein Structure, Non-U.S. Gov't Thermus thermophilus/*enzymology, Secondary Sequence Homology, Unité ARN, X-Ray/methods DNA Probes Genes

1993

Poterszman A, Plateau P, Moras D, Blanquet S, Mazauric M H, Kreutzer R, Kern D

Sequence, overproduction and crystallization of aspartyl-tRNA synthetase from Thermus thermophilus. Implications for the structure of prokaryotic aspartyl-tRNA synthetases Journal Article

In: FEBS Lett, vol. 325, no. 3, pp. 183-186, 1993, ISBN: 8319804, (0014-5793 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence Aspartate-tRNA Ligase/chemistry/*genetics/metabolism Base Sequence Cloning, Bacterial Models, Molecular Crystallization Genes, Molecular Molecular Sequence Data Oligodeoxyribonucleotides Sequence Homology, Non-U.S. Gov't Thermus thermophilus/*enzymology/genetics, Unité ARN

Oguiza J A, Malumbres M, Eriani G, Pisabarro A, Mateos L M, Martin F, Martin J F

A gene encoding arginyl-tRNA synthetase is located in the upstream region of the lysA gene in Brevibacterium lactofermentum: regulation of argS-lysA cluster expression by arginine Journal Article

In: J Bacteriol, vol. 175, no. 22, pp. 7356-7362, 1993, ISBN: 8226683, (0021-9193 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Amino Acid Sequence Amino Acyl-tRNA Ligases/genetics Arginine/*pharmacology Arginine-tRNA Ligase/biosynthesis/*genetics Bacteria/enzymology Brevibacterium/*enzymology/*genetics Carboxy-Lyases/*genetics Cloning, Bacterial Molecular Sequence Data Molecular Weight *Multigene Family Plasmids Restriction Mapping Sequence Homology, Bacterial/*drug effects Gene Expression Regulation, Enzymologic/drug effects *Genes, ERIANI, Molecular Comparative Study Escherichia coli/genetics/growth & development Fungi/enzymology Gene Expression Regulation, Non-U.S. Gov't, Structural, Unité ARN