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2005

Lescoute A, Leontis N B, Massire C, Westhof E

Recurrent structural RNA motifs, Isostericity Matrices and sequence alignments Journal Article

In: Nucleic Acids Res, vol. 33, no. 8, pp. 2395-2409, 2005, ISBN: 15860776, (1362-4962 Journal Article).

Abstract | Links | BibTeX | Tags: Base Pairing Models, Molecular Nucleic Acid Conformation RNA, Non-U.S. Gov't Research Support, Nucleic Acid, P.H.S. *Sequence Alignment Sequence Analysis, Ribosomal/*chemistry Research Support, RNA/*methods Sequence Homology, U.S. Gov't, Unité ARN, WESTHOF

Champagne K S, Sissler M, Larrabee Y, Doublie S, Francklyn C S

Activation of the hetero-octameric ATP phosphoribosyl transferase through subunit interface rearrangement by a tRNA synthetase paralog Journal Article

In: J Biol Chem, vol. 280, no. 40, pp. 34096-34104, 2005, ISBN: 16051603, (0021-9258 (Print) Journal Article).

Abstract | Links | BibTeX | Tags: Extramural Research Support, FLORENTZ ATP Phosphoribosyltransferase/*metabolism Allosteric Regulation Amino Acyl-tRNA Synthetases DNA Mutational Analysis Enzyme Activation *Models, N.I.H., Non-P.H.S. Research Support, P.H.S., SISSLER, Structural Phosphates/metabolism Research Support, U.S. Gov't, Unité ARN

Castellano S, Lobanov A V, Chapple C, Novoselov S V, Albrecht M, Hua D, Lescure A, Lengauer T, Krol A, Gladyshev V N, Guigo R

Diversity and functional plasticity of eukaryotic selenoproteins: identification and characterization of the SelJ family Journal Article

In: Proc Natl Acad Sci U S A, vol. 102, no. 45, pp. 16188-16193, 2005, ISBN: 16260744, (0027-8424 (Print) Journal Article).

Abstract | Links | BibTeX | Tags: Extramural Research Support, KROL Adenosine Diphosphate Ribose/metabolism Animals Fish Proteins/chemistry/genetics/*physiology Genome Mice NIH 3T3 Cells Phylogeny Promoter Regions (Genetics) Proteome Research Support, LESCURE, N.I.H., Non-P.H.S. Selenoproteins/chemistry/genetics/*physiology Tetraodontiformes/*genetics, Non-U.S. Gov't Research Support, U.S. Gov't, Unité ARN

2004

Wagner C, Ehresmann C, Ehresmann B, Brunel C

Mechanism of dimerization of bicoid mRNA: initiation and stabilization Journal Article

In: J Biol Chem, vol. 279, no. 6, pp. 4560-4569, 2004, ISBN: 14607826, (0021-9258 Journal Article).

Abstract | Links | BibTeX | Tags: BRUNEL Animals Base Sequence Dimerization Drosophila Proteins/*genetics Drosophila melanogaster/embryology/*genetics/*metabolism Homeodomain Proteins/*genetics Kinetics Molecular Sequence Data Nucleic Acid Conformation RNA Interference RNA Stability RNA, Messenger/chemistry/*genetics/*metabolism Support, Non-U.S. Gov't Support, P.H.S. Thermodynamics Trans-Activators/*genetics, U.S. Gov't, Unité ARN

Sohm B, Sissler M, Park H, King M P, Florentz C

Recognition of human mitochondrial tRNALeu(UUR) by its cognate leucyl-tRNA synthetase Journal Article

In: J Mol Biol, vol. 339, no. 1, pp. 17-29, 2004, ISBN: 15123417, (0022-2836 Journal Article).

Abstract | Links | BibTeX | Tags: Cultured, FLORENTZ, FLORENTZ *Acylation Base Sequence Comparative Study Human Kinetics Leucine/metabolism Leucine-tRNA Ligase/genetics/*metabolism Mitochondria/*metabolism Molecular Sequence Data Mutation Nucleic Acid Conformation Osteosarcoma/metabolism RNA/*genetics/metabolism RNA, Genetic/*genetics Tumor Cells, Leu/genetics/*metabolism Solutions Substrate Specificity Support, Non-U.S. Gov't Support, P.H.S. Transcription, SISSLER, Transfer, U.S. Gov't, Unité ARN

Serra M J, Smolter P E, Westhof E

Pronounced instability of tandem IU base pairs in RNA Journal Article

In: Nucleic Acids Res, vol. 32, no. 5, pp. 1824-1828, 2004, ISBN: 15037659, (1362-4962 Journal Article).

Abstract | Links | BibTeX | Tags: Base Pairing Inosine/*chemistry Magnesium/chemistry Nucleic Acid Conformation RNA/*chemistry RNA Stability Support, Non-P.H.S. Thermodynamics Uracil/*chemistry, U.S. Gov't, Unité ARN, WESTHOF

Rangan P, Masquida B, Westhof E, Woodson S A

Architecture and folding mechanism of the Azoarcus Group I Pre-tRNA Journal Article

In: J Mol Biol, vol. 339, no. 1, pp. 41-51, 2004, ISBN: 15123419, (0022-2836 Journal Article).

Abstract | Links | BibTeX | Tags: Azoarcus/enzymology/*genetics Base Sequence Binding Sites Exoribonucleases/metabolism Hydroxyl Radical/metabolism Introns/*genetics Magnesium/chemistry Models, Bacterial/*chemistry/genetics/*metabolism RNA, Ile/chemistry/*genetics Substrate Specificity Support, Molecular Molecular Sequence Data *Nucleic Acid Conformation RNA Precursors/*genetics RNA Splice Sites/genetics RNA Splicing RNA, Non-U.S. Gov't Support, P.H.S., Transfer, U.S. Gov't, Unité ARN, WESTHOF

Mathy N, Pellegrini O, Serganov A, Patel D J, Ehresmann C, Portier C

Specific recognition of rpsO mRNA and 16S rRNA by Escherichia coli ribosomal protein S15 relies on both mimicry and site differentiation Journal Article

In: Mol Microbiol, vol. 52, no. 3, pp. 661-675, 2004, ISBN: 15101974, (0950-382x Journal Article).

Abstract | Links | BibTeX | Tags: 16S/chemistry/genetics/*metabolism Recombinant Fusion Proteins/metabolism Ribosomal Proteins/chemistry/*genetics/*metabolism Sequence Alignment Support, Bacterial Models, EHRESMANN Amino Acid Sequence Base Sequence Escherichia coli Proteins/chemistry/genetics/*metabolism Gene Expression Regulation, Messenger/metabolism RNA, Molecular *Molecular Mimicry Molecular Sequence Data Mutagenesis, Non-U.S. Gov't Support, P.H.S., Ribosomal, Secondary RNA, Site-Directed Nucleic Acid Conformation Protein Structure, U.S. Gov't, Unité ARN

Levinger L, Oestreich I, Florentz C, Morl M

A pathogenesis-associated mutation in human mitochondrial tRNALeu(UUR) leads to reduced 3'-end processing and CCA addition Journal Article

In: J Mol Biol, vol. 337, no. 3, pp. 535-544, 2004, ISBN: 15019775, (0022-2836 Journal Article).

Abstract | Links | BibTeX | Tags: FLORENTZ, FLORENTZ Human Kinetics Mitochondrial Diseases/*genetics Nucleic Acid Conformation *Point Mutation RNA/*genetics/physiology *RNA 3' End Processing RNA Nucleotidyltransferases/metabolism RNA, Leu/*genetics/physiology Support, Non-U.S. Gov't Support, P.H.S., Transfer, U.S. Gov't, Unité ARN

Levinger L, Mörl M, Florentz C

Mitochondrial tRNA 3' end metabolism and human disease Journal Article

In: Nucleic Acids Res, vol. 32, no. 18, pp. 5430-5441, 2004, ISBN: 15477393, (1362-4962 Journal Article Review Review, Tutorial).

Abstract | Links | BibTeX | Tags: FLORENTZ, Non-U.S. Gov't Support, P.H.S., Transfer/chemistry/*genetics/*metabolism Support, U.S. Gov't, Unité ARN

2003

Yang H, Jossinet F, Leontis N, Chen L, Westbrook J, Berman H, Westhof E

Tools for the automatic identification and classification of RNA base pairs Journal Article

In: Nucleic Acids Res, vol. 31, no. 13, pp. 3450-3460, 2003, ISBN: 12824344, (1362-4962 Journal Article).

Abstract | Links | BibTeX | Tags: Algorithms Base Pairing Base Sequence Computer Graphics Data Interpretation, Molecular Nucleic Acid Conformation RNA/*chemistry/classification *Software Support, Non-P.H.S. Support, Non-U.S. Gov't Support, Nucleic Acid Internet Models, P.H.S., Statistical Databases, U.S. Gov't, Unité ARN, WESTHOF

Wilhelm F X, Wilhelm M, Gabriel A

Extension and cleavage of the polypurine tract plus-strand primer by Ty1 reverse transcriptase Journal Article

In: J Biol Chem, vol. 278, no. 48, pp. 47678-47684, 2003, ISBN: 14500728, (0021-9258 Journal Article).

Abstract | Links | BibTeX | Tags: Base Sequence DNA/chemistry DNA Primers DNA Replication Models, Calf Thymus/chemistry Support, Genetic, Genetic Molecular Sequence Data Purines/*chemistry RNA/chemistry RNA, Messenger/metabolism RNA, Non-U.S. Gov't Support, P.H.S. Templates, U.S. Gov't, Unité ARN, Viral RNA-Directed DNA Polymerase/*chemistry Recombinant Proteins/chemistry Retroelements/*genetics Ribonuclease H

Tsai H Y, Masquida B, Biswas R, Westhof E, Gopalan V

Molecular modeling of the three-dimensional structure of the bacterial RNase P holoenzyme Journal Article

In: J Mol Biol, vol. 325, no. 4, pp. 661-675, 2003, ISBN: 12507471, (0022-2836 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Sequence Base Sequence Catalytic Domain Computer Simulation Cysteine/chemistry DNA Footprinting DNA, Bacterial/chemistry/genetics/metabolism RNA, Bacterial/genetics Edetic Acid Endoribonucleases/*chemistry/genetics/metabolism Escherichia coli/*enzymology/genetics Evolution, Catalytic/*chemistry/genetics/metabolism Ribonuclease P Support, Molecular Ferrous Compounds Holoenzymes/chemistry/genetics/metabolism Hydroxyl Radical/chemistry Models, Molecular Molecular Sequence Data Mutagenesis, Non-P.H.S. Support, P.H.S., Site-Directed Nucleic Acid Conformation Protein Subunits RNA, U.S. Gov't, Unité ARN, WESTHOF

Thisse C, Degrave A, Kryukov G V, Gladyshev V N, Obrecht-Pflumio S, Krol A, Thisse B, Lescure A

Spatial and temporal expression patterns of selenoprotein genes during embryogenesis in zebrafish Journal Article

In: Gene Expr Patterns, vol. 3, no. 4, pp. 525-532, 2003, ISBN: 12915322, (1567-133x Journal Article).

Abstract | Links | BibTeX | Tags: Animals Gene Expression Regulation, Developmental In Situ Hybridization Molecular Sequence Data Proteins/*genetics/metabolism RNA Probes RNA, LESCURE, Messenger/metabolism Support, Non-U.S. Gov't Support, P.H.S. Tissue Distribution Zebrafish/*embryology, U.S. Gov't, Unité ARN

Serganov A, Polonskaia A, Ehresmann B, Ehresmann C, Patel D J

Ribosomal protein S15 represses its own translation via adaptation of an rRNA-like fold within its mRNA Journal Article

In: EMBO J, vol. 22, no. 8, pp. 1898-1908, 2003, ISBN: 12682022, (0261-4189 Journal Article).

Abstract | Links | BibTeX | Tags: Bacterial Proteins/genetics/metabolism Binding Sites *Nucleic Acid Conformation Protein Binding Protein Footprinting RNA, Genetic, Messenger/chemistry/*metabolism Repressor Proteins/genetics/*metabolism Ribosomal Proteins/genetics/*metabolism Ribosomes/metabolism Support, P.H.S. Thermus thermophilus/genetics/metabolism *Translation, U.S. Gov't, Unité ARN

Rangan P, Masquida B, Westhof E, Woodson S A

Assembly of core helices and rapid tertiary folding of a small bacterial group I ribozyme Journal Article

In: Proc Natl Acad Sci U S A, vol. 100, no. 4, pp. 1574-1579, 2003, ISBN: 12574513, (0027-8424 Journal Article).

Abstract | Links | BibTeX | Tags: Azoarcus/*enzymology Base Sequence Introns Magnesium/chemistry Models, Catalytic/*chemistry/genetics Support, Molecular Molecular Sequence Data Nucleic Acid Conformation *Protein Folding Protein Structure, Non-U.S. Gov't Support, P.H.S., Tertiary RNA, U.S. Gov't, Unité ARN, WESTHOF

Levinger L, Giege R, Florentz C

Pathology-related substitutions in human mitochondrial tRNA(Ile) reduce precursor 3' end processing efficiency in vitro Journal Article

In: Nucleic Acids Res, vol. 31, no. 7, pp. 1904-1912, 2003, ISBN: 12655007, (1362-4962 Journal Article).

Abstract | Links | BibTeX | Tags: Base Sequence DNA, FLORENTZ, Ile/*genetics/metabolism Support, Mitochondrial/*genetics Endoribonucleases/metabolism Hela Cells Human Kinetics Molecular Sequence Data Mutation RNA Precursors/genetics/metabolism *RNA Processing, Non-U.S. Gov't Support, P.H.S., Post-Transcriptional RNA, Transfer, U.S. Gov't, Unité ARN

Leontis N B, Westhof E

Analysis of RNA motifs Journal Article

In: Curr Opin Struct Biol, vol. 13, no. 3, pp. 300-308, 2003, ISBN: 12831880, (0959-440x Journal Article Review Review, Tutorial).

Abstract | Links | BibTeX | Tags: *Base Pairing Binding Sites Magnetic Resonance Imaging *Nucleic Acid Conformation RNA/*chemistry RNA, Chloroplast/chemistry Support, P.H.S., U.S. Gov't, Unité ARN, WESTHOF

Frugier M, Giege R, Schimmel P

RNA recognition by designed peptide fusion creates Journal Article

In: Proc Natl Acad Sci U S A, vol. 100, no. 13, pp. 7471-7475, 2003, ISBN: 12796515, (0027-8424 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Motifs Amino Acid Sequence Amino Acyl-tRNA Ligases/*chemistry Base Sequence Binding Sites Catalytic Domain Escherichia coli/genetics/metabolism *Genetic Techniques Kinetics Models, FRUGIER, Genetic Molecular Sequence Data Mutation Nucleic Acid Conformation Peptides/*chemistry Protein Binding Protein Structure, Non-U.S. Gov't Support, P.H.S. Time Factors, Tertiary RNA/chemistry Recombinant Fusion Proteins/metabolism Support, U.S. Gov't, Unité ARN

2002

Gottar Marie, Gobert Vanessa, Michel Tatiana, Belvin Marcia, Duyk Geoffrey, Hoffmann Jules A, Ferrandon Dominique, Royet Julien

The Drosophila immune response against Gram-negative bacteria is mediated by a peptidoglycan recognition protein Journal Article

In: Nature, vol. 416, pp. 640–644, 2002, ISBN: 0028-0836.

Abstract | Links | BibTeX | Tags: Animal, Anti-Infective Agents/metabolism, Carrier Proteins/biosynthesis/genetics/*immunology, Drosophila melanogaster/genetics/*immunology/*microbiology, Drosophila Proteins/genetics/metabolism, Epistasis, Female, ferrandon, Genes, Genetic, Genetic Predisposition to Disease, Gram-Negative Bacteria/*immunology/physiology, hoffmann, Human, Insect/genetics, M3i, Messenger/genetics/metabolism, Mutation, Non-U.S. Gov't, P.H.S., Phenotype, RNA, Signal Transduction, Support, Survival Rate, Transgenes/genetics, U.S. Gov't

Wilhelm M, Fishman J A, Pontikis R, Aubertin A M, Wilhelm F X

Susceptibility of recombinant porcine endogenous retrovirus reverse transcriptase to nucleoside and non-nucleoside inhibitors Journal Article

In: Cell Mol Life Sci, vol. 59, no. 12, pp. 2184-2190, 2002, ISBN: 12568344, (1420-682x Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Sequence Animals Chlorides/metabolism Cloning, Calf Thymus/metabolism Sodium Chloride/metabolism Support, Non-U.S. Gov't Support, P.H.S. Swine, U.S. Gov't, Unité ARN

Waugh A, Gendron P, Altman R, Brown J W, Case D, Gautheret D, Harvey S C, Leontis N, Westbrook J, Westhof E, Zuker M, Major F

RNAML: a standard syntax for exchanging RNA information Journal Article

In: RNA, vol. 8, no. 6, pp. 707-717, 2002, ISBN: 12088144, (1355-8382 Journal Article).

Abstract | Links | BibTeX | Tags: *Databases, Non-P.H.S. Support, Non-U.S. Gov't Support, Nucleic Acid *Nucleic Acid Conformation Programming Languages RNA/*chemistry Support, P.H.S., U.S. Gov't, Unité ARN, WESTHOF

Serra M J, Baird J D, Dale T, Fey B L, Retatagos K, Westhof E

Effects of magnesium ions on the stabilization of RNA oligomers of defined structures Journal Article

In: RNA, vol. 8, no. 3, pp. 307-323, 2002, ISBN: 12003491, (1355-8382 Journal Article).

Abstract | Links | BibTeX | Tags: Base Pairing Heat Hydrogen Bonding Magnesium/*pharmacology Models, Molecular Nucleic Acid Conformation RNA/*metabolism RNA Stability/*drug effects Support, Non-P.H.S. Support, Non-U.S. Gov't Support, P.H.S. Thermodynamics, U.S. Gov't, Unité ARN, WESTHOF

Mohr S, Leikauf G D, Keith G, Rihn B H

Microarrays as cancer keys: an array of possibilities Journal Article

In: J Clin Oncol, vol. 20, no. 14, pp. 3165-3175, 2002, ISBN: 12118031, (0732-183x Journal Article Review Review, Tutorial).

Abstract | Links | BibTeX | Tags: Animals Chromosome Aberrations *Gene Expression Profiling/methods *Gene Expression Regulation, DNA/methods Support, Neoplastic Genotype Human Mutation Neoplasms/*genetics *Oligonucleotide Array Sequence Analysis/methods Oncogenes/*genetics Polymorphism (Genetics) Proteome/genetics *Sequence Analysis, P.H.S., U.S. Gov't, Unité ARN

Leontis N B, Stombaugh J, Westhof E

The non-Watson-Crick base pairs and their associated isostericity matrices Journal Article

In: Nucleic Acids Res, vol. 30, no. 16, pp. 3497-3531, 2002, ISBN: 12177293, (1362-4962 Journal Article).

Abstract | Links | BibTeX | Tags: Algorithms *Base Pairing Base Sequence Hydrogen Bonding Models, Molecular RNA/*chemistry/classification/genetics Sequence Homology Support, Non-P.H.S. Support, P.H.S. Terminology, U.S. Gov't, Unité ARN, WESTHOF

Leontis N B, Stombaugh J, Westhof E

Motif prediction in ribosomal RNAs Lessons and prospects for automated motif prediction in homologous RNA molecules Journal Article

In: Biochimie, vol. 84, no. 9, pp. 961-973, 2002, ISBN: 12458088, (0300-9084 Journal Article).

Abstract | Links | BibTeX | Tags: Bacterial/*chemistry/genetics RNA, Base Pairing Base Sequence Catalytic Domain Conserved Sequence Databases, Factual Models, Molecular *Nucleic Acid Conformation RNA, Non-P.H.S. Support, P.H.S., Ribosomal/*chemistry/genetics Sequence Alignment Support, U.S. Gov't, Unité ARN, WESTHOF

2001

Wilhelm M, Uzun O, Mules E H, Gabriel A, Wilhelm F X

Polypurine tract formation by Ty1 RNase H Journal Article

In: J Biol Chem, vol. 276, no. 50, pp. 47695-47701, 2001, ISBN: 11595735, (0021-9258 Journal Article).

Abstract | Links | BibTeX | Tags: Base Sequence Binding Sites DNA/metabolism DNA Primers/pharmacology Hydrolysis Molecular Sequence Data Mutation Protein Binding *Purines RNA/metabolism RNA-Directed DNA Polymerase/*chemistry/*metabolism Recombinant Proteins/metabolism *Retroelements Ribonuclease H, Calf Thymus/*chemistry/*genetics/metabolism Support, Non-U.S. Gov't Support, P.H.S. Time Factors, U.S. Gov't, Unité ARN

Webb A E, Rose M A, Westhof E, Weeks K M

Protein-dependent transition states for ribonucleoprotein assembly Journal Article

In: J Mol Biol, vol. 309, no. 5, pp. 1087-1100, 2001, ISBN: 11399081, (0022-2836 Journal Article).

Abstract | Links | BibTeX | Tags: Allosteric Site Base Sequence Catalysis Catalytic Domain Fungal Proteins/*metabolism Hydroxyl Radical/metabolism Introns/genetics Iodine/metabolism Kinetics Models, Catalytic/chemistry/genetics/metabolism RNA-Binding Proteins/*metabolism Ribonucleoproteins/chemistry/*genetics/*metabolism Saccharomyces cerevisiae/enzymology/genetics *Saccharomyces cerevisiae Proteins Support, Molecular Neurospora crassa *Nucleic Acid Conformation Protein Binding RNA/chemistry/genetics/metabolism RNA Splicing/*genetics RNA Stability RNA, Non-U.S. Gov't Support, P.H.S., U.S. Gov't, Unité ARN

Senger B, Despons L, Walter P, Jakubowski H, Fasiolo F

Yeast cytoplasmic and mitochondrial methionyl-tRNA synthetases: two structural frameworks for identical functions Journal Article

In: J Mol Biol, vol. 311, no. 1, pp. 205-216, 2001, ISBN: 11469869, (0022-2836 Journal Article).

Abstract | Links | BibTeX | Tags: Acylation Amino Acid Sequence Binding Sites Coenzyme A/metabolism Comparative Study Cysteine/genetics/metabolism Cytoplasm/*enzymology Genes, Fungal/genetics Genetic Complementation Test Homocysteine/genetics/metabolism Kinetics Methionine/metabolism Methionine-tRNA Ligase/*chemistry/genetics/*metabolism Mitochondria/*enzymology Molecular Sequence Data Mutation/genetics Protein Transport RNA, Met/genetics/metabolism Saccharomyces cerevisiae/cytology/*enzymology/genetics Sequence Alignment Structure-Activity Relationship Support, Non-P.H.S. Zinc/metabolism Zinc Fingers/genetics/physiology, Non-U.S. Gov't Support, Transfer, U.S. Gov't, Unité ARN

2000

Tzou P, Ohresser S, Ferrandon Dominique, Capovilla Maria, Reichhart Jean-Marc, Lemaitre Bruno, Hoffmann Jules A, Imler Jean-Luc

Tissue-specific inducible expression of antimicrobial peptide genes in Drosophila surface epithelia Journal Article

In: Immunity, vol. 13, pp. 737–48., 2000, ISSN: 1074-7613.

Abstract | BibTeX | Tags: *Genes, Animal, Anti-Infective Agents/*immunology/metabolism, Drosophila/genetics/*immunology, ferrandon, Gene Expression Regulation/*immunology, Genes, Glycoside Hydrolases/immunology, hoffmann, Human, imler, Insect, Insect Proteins/genetics/immunology, M3i, Non-U.S. Gov't, Organ Specificity, P.H.S., reichhart, Reporter, Support, Transfection, U.S. Gov't

Moine H, Squires C L, Ehresmann B, Ehresmann C

In vivo selection of functional ribosomes with variations in the rRNA-binding site of Escherichia coli ribosomal protein S8: evolutionary implications Journal Article

In: Proc Natl Acad Sci U S A, vol. 97, no. 2, pp. 605-610, 2000, ISBN: 10639126, (0027-8424http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citation&list_uids=10639126 Journal Article).

Abstract | Links | BibTeX | Tags: 16S/genetics/metabolism Recombinant Fusion Proteins/genetics/metabolism Ribosomal Proteins/genetics/*metabolism Ribosomes/genetics/*metabolism Spectinomycin/pharmacology Support, Base Sequence Binding Sites/genetics Binding, Competitive Cell Division/genetics Cloning, Microbial Escherichia coli/drug effects/*genetics/metabolism Evolution, Molecular Drug Resistance, Molecular Protein Binding RNA, P.H.S. Variation (Genetics), Ribosomal, Ribosomal/genetics/*metabolism RNA, U.S. Gov't, Unité ARN

Libri D, Lescure A, Rosbash M

Splicing enhancement in the yeast rp51b intron Journal Article

In: RNA, vol. 6, no. 3, pp. 352-368, 2000, ISBN: 10744020, (1355-8382 Journal Article).

Abstract | Links | BibTeX | Tags: 5' Untranslated Regions/genetics DNA Mutational Analysis Introns/*genetics Multigene Family Nucleic Acid Conformation RNA Splicing/*genetics *Regulatory Sequences, LESCURE, Non-U.S. Gov't Support, Nucleic Acid Ribonucleoprotein, P.H.S. Uridine/metabolism, U.S. Gov't, U1 Small Nuclear/chemistry/genetics Saccharomyces cerevisiae/*genetics Support, Unité ARN

Costa M, Michel F, Westhof E

A three-dimensional perspective on exon binding by a group II self-splicing intron Journal Article

In: EMBO J, vol. 19, no. 18, pp. 5007-5018, 2000, ISBN: 10990464, (0261-4189 Journal Article).

Abstract | Links | BibTeX | Tags: Base Sequence Catalysis *Exons Hydroxyl Radical *Introns Kinetics *Models, Catalytic/metabolism Support, Genetic, Genetic Molecular Sequence Data Nucleic Acid Conformation *RNA Splicing RNA, Non-U.S. Gov't Support, P.H.S. Temperature Transcription, U.S. Gov't, Unité ARN

Becker H D, Roy H, Moulinier L, Mazauric M H, Keith G, Kern D

Thermus thermophilus contains an eubacterial and an archaebacterial aspartyl-tRNA synthetase Journal Article

In: Biochemistry, vol. 39, no. 12, pp. 3216-3230, 2000, ISBN: 10727213, (0006-2960 Journal Article).

Abstract | Links | BibTeX | Tags: Amino Acid Support, Asn/genetics/metabolism RNA, Asp/metabolism Sequence Alignment Sequence Homology, Molecular Consensus Sequence Escherichia coli/enzymology/genetics Human Kinetics Molecular Sequence Data Peptide Fragments/chemistry RNA, Non-U.S. Gov't Support, P.H.S. Thermus thermophilus/*enzymology/genetics, Transfer, U.S. Gov't, Unité ARN

1999

Perreau V M, Keith G, Holmes W M, Przykorska A, Santos M A, Tuite M F

The Candida albicans CUG-decoding ser-tRNA has an atypical anticodon stem-loop structure Journal Article

In: J Mol Biol, vol. 293, no. 5, pp. 1039-1053, 1999, ISBN: 10547284, (0022-2836 Journal Article).

Abstract | Links | BibTeX | Tags: Anticodon/*chemistry/*genetics/metabolism Base Sequence Candida albicans/*genetics Evolution, Fungal/chemistry/genetics/metabolism RNA, Molecular Genetic Code/genetics Imidazoles/metabolism Lead/metabolism Methylation Mutation/genetics *Nucleic Acid Conformation Nucleosides/genetics/metabolism RNA, Non-P.H.S. Support, Non-U.S. Gov't Support, P.H.S. tRNA Methyltransferases/metabolism, Ser/*chemistry/*genetics/metabolism Ribonucleases/metabolism Saccharomyces cerevisiae/genetics Solutions Support, Transfer, U.S. Gov't, Unité ARN

1997

Redlak M, Andraos-Selim C, Giege R, Florentz C, Holmes W M

Interaction of tRNA with tRNA (guanosine-1)methyltransferase: binding specificity determinants involve the dinucleotide G36pG37 and tertiary structure Journal Article

In: Biochemistry, vol. 36, no. 29, pp. 8699-8709, 1997, ISBN: 9220956, (0006-2960 Journal Article).

Abstract | Links | BibTeX | Tags: Anticodon/metabolism Base Sequence Binding Sites Dinucleoside Phosphates/*metabolism Escherichia coli Kinetics Molecular Sequence Data *Nucleic Acid Conformation Poly G/*metabolism RNA, FLORENTZ, Non-P.H.S. tRNA Methyltransferases/isolation & purification/*metabolism, Non-U.S. Gov't Support, Transfer/chemistry/*metabolism Substrate Specificity Support, U.S. Gov't, Unité ARN

Ng J D, Lorber B, Giege R, Koszelak S, Day J, Greenwood A, McPherson A

Comparative analysis of thaumatin crystals grown on earth and in microgravity Journal Article

In: Acta Crystallogr D Biol Crystallogr, vol. 53, no. Pt 6, pp. 724-733, 1997, ISBN: 11540583, (0907-4449 Journal Article).

Abstract | Links | BibTeX | Tags: Comparative Study Crystallization Crystallography/instrumentation/methods Crystallography, Non-P.H.S. Sweetening Agents/*chemistry *Weightlessness, Non-U.S. Gov't Support, U.S. Gov't, Unité ARN, X-Ray Particle Size Plant Proteins/*chemistry Space Flight/*instrumentation Support